Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   QNH19_RS13190 Genome accession   NZ_CP126104
Coordinates   2696726..2697478 (-) Length   250 a.a.
NCBI ID   WP_283886941.1    Uniprot ID   -
Organism   Bacillus velezensis strain MB7_B11     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2691726..2702478
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH19_RS13165 (QNH19_13165) mreC 2692162..2693025 (-) 864 WP_007408166.1 rod shape-determining protein MreC -
  QNH19_RS13170 (QNH19_13170) mreB 2693056..2694069 (-) 1014 WP_003152647.1 cell shape-determining protein MreB -
  QNH19_RS13175 (QNH19_13175) radC 2694161..2694856 (-) 696 WP_007408165.1 DNA repair protein RadC -
  QNH19_RS13180 (QNH19_13180) - 2694888..2695457 (-) 570 WP_283886937.1 Maf family protein -
  QNH19_RS13185 (QNH19_13185) - 2695598..2696599 (-) 1002 WP_283886939.1 SPOR domain-containing protein -
  QNH19_RS13190 (QNH19_13190) comC 2696726..2697478 (-) 753 WP_283886941.1 A24 family peptidase Machinery gene
  QNH19_RS13195 (QNH19_13195) - 2697617..2698909 (-) 1293 WP_283886943.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  QNH19_RS13200 (QNH19_13200) - 2698968..2701610 (-) 2643 WP_283886944.1 valine--tRNA ligase -
  QNH19_RS13205 (QNH19_13205) - 2702063..2702254 (+) 192 WP_003152639.1 hypothetical protein -

Sequence

Protein


Download         Length: 250 a.a.        Molecular weight: 27218.95 Da        Isoelectric Point: 9.5938

>NTDB_id=836115 QNH19_RS13190 WP_283886941.1 2696726..2697478(-) (comC) [Bacillus velezensis strain MB7_B11]
MLLILFFLGLIFGSFFYTAACRIPLRISVISPRSACSFCRLPLSWGELVPVVSYILQRGRCRNCRAKLSVMYPAAECWTA
CLFTAAGIHFGFSKELLVALLFLSLLMIVTMTDLQYMLIPDKVLLFFLPLFIAGRMFSPLNSWYAGFAGAVCGFFLLVFI
MFVSKGGIGAGDVKLFGVIGLTLGVKLVLIAFFLSVMIGAVYGMCAAARGRLGKKQPFPFAPAISAGSALSYLYGEELFS
FYIKLASGGA

Nucleotide


Download         Length: 753 bp        

>NTDB_id=836115 QNH19_RS13190 WP_283886941.1 2696726..2697478(-) (comC) [Bacillus velezensis strain MB7_B11]
GTGCTTTTGATTCTGTTTTTTCTCGGCTTGATTTTCGGTTCTTTTTTTTATACAGCAGCGTGCCGTATCCCGCTGCGAAT
CTCGGTTATTTCGCCGCGTTCAGCCTGTTCGTTTTGCCGCTTGCCGCTCTCCTGGGGGGAGCTTGTGCCCGTCGTTTCCT
ATATTCTGCAAAGAGGCAGATGCAGAAACTGCCGTGCGAAGCTGTCGGTTATGTATCCGGCGGCGGAATGCTGGACGGCA
TGTTTATTCACGGCTGCAGGTATTCATTTCGGTTTCTCAAAAGAACTGTTAGTCGCGCTGTTATTTCTGTCTCTGCTCAT
GATTGTTACTATGACGGATCTGCAATATATGCTGATTCCTGACAAGGTTCTGCTGTTTTTTCTTCCGCTTTTCATCGCCG
GCCGTATGTTTTCTCCGCTGAATTCATGGTATGCAGGGTTTGCCGGAGCCGTTTGCGGATTTTTTCTGCTTGTTTTTATC
ATGTTTGTCAGTAAAGGAGGCATCGGCGCAGGTGATGTGAAACTGTTTGGGGTGATCGGCCTGACGCTCGGCGTGAAGCT
CGTGCTCATTGCATTCTTTCTTTCCGTTATGATCGGAGCCGTATACGGTATGTGCGCCGCAGCCCGGGGCAGGCTTGGTA
AAAAGCAGCCATTTCCGTTTGCGCCGGCCATCTCAGCCGGGAGCGCTTTGAGTTATTTATACGGTGAAGAGCTGTTTTCG
TTTTACATCAAGCTCGCTTCAGGAGGGGCTTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-90)

Type IV leader peptidase family (Peptidase_A24)

(101-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

58.468

99.2

0.58