Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QNH19_RS07245 Genome accession   NZ_CP126104
Coordinates   1387821..1388417 (+) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain MB7_B11     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1382821..1393417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH19_RS07215 (QNH19_07215) - 1383034..1383489 (+) 456 WP_132106133.1 flavodoxin -
  QNH19_RS07220 (QNH19_07220) dapD 1383571..1384281 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QNH19_RS07225 (QNH19_07225) - 1384352..1385476 (+) 1125 WP_012117444.1 N-acetyldiaminopimelate deacetylase -
  QNH19_RS07230 (QNH19_07230) - 1385537..1385782 (+) 246 WP_003154596.1 YkuS family protein -
  QNH19_RS07235 (QNH19_07235) - 1385816..1386622 (-) 807 WP_012117445.1 mechanosensitive ion channel family protein -
  QNH19_RS07240 (QNH19_07240) - 1386910..1387368 (+) 459 WP_283888272.1 TlpA disulfide reductase family protein -
  QNH19_RS07245 (QNH19_07245) rok 1387821..1388417 (+) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  QNH19_RS07250 (QNH19_07250) - 1388438..1389430 (-) 993 WP_012117448.1 hypothetical protein -
  QNH19_RS07255 (QNH19_07255) - 1389576..1390178 (+) 603 WP_039251605.1 molybdenum cofactor guanylyltransferase -
  QNH19_RS07260 (QNH19_07260) - 1390230..1391249 (+) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  QNH19_RS07265 (QNH19_07265) glp 1391267..1392559 (+) 1293 WP_043021217.1 gephyrin-like molybdotransferase Glp -
  QNH19_RS07270 (QNH19_07270) mobB 1392520..1393041 (+) 522 WP_007409631.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=836090 QNH19_RS07245 WP_012117447.1 1387821..1388417(+) (rok) [Bacillus velezensis strain MB7_B11]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=836090 QNH19_RS07245 WP_012117447.1 1387821..1388417(+) (rok) [Bacillus velezensis strain MB7_B11]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATTAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843