Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   QNH19_RS01770 Genome accession   NZ_CP126104
Coordinates   329365..329763 (-) Length   132 a.a.
NCBI ID   WP_007609299.1    Uniprot ID   -
Organism   Bacillus velezensis strain MB7_B11     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 324365..334763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH19_RS01745 (QNH19_01745) - 324537..325739 (+) 1203 WP_069007411.1 GTP-binding protein -
  QNH19_RS01750 (QNH19_01750) - 325804..326940 (+) 1137 WP_052827030.1 zinc-dependent alcohol dehydrogenase -
  QNH19_RS01755 (QNH19_01755) - 326955..327389 (+) 435 WP_012116767.1 RDD family protein -
  QNH19_RS01760 (QNH19_01760) - 327461..327784 (+) 324 WP_007409357.1 YckD family protein -
  QNH19_RS01765 (QNH19_01765) - 327888..329324 (+) 1437 WP_025284208.1 family 1 glycosylhydrolase -
  QNH19_RS01770 (QNH19_01770) nin/comJ 329365..329763 (-) 399 WP_007609299.1 competence protein ComJ Regulator
  QNH19_RS01775 (QNH19_01775) nucA/comI 329784..330221 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  QNH19_RS01780 (QNH19_01780) hxlB 330580..331137 (-) 558 WP_007409354.1 6-phospho-3-hexuloisomerase -
  QNH19_RS01785 (QNH19_01785) hxlA 331134..331769 (-) 636 WP_283887729.1 3-hexulose-6-phosphate synthase -
  QNH19_RS01790 (QNH19_01790) - 332002..332364 (+) 363 WP_012116770.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14977.03 Da        Isoelectric Point: 4.9712

>NTDB_id=836066 QNH19_RS01770 WP_007609299.1 329365..329763(-) (nin/comJ) [Bacillus velezensis strain MB7_B11]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=836066 QNH19_RS01770 WP_007609299.1 329365..329763(-) (nin/comJ) [Bacillus velezensis strain MB7_B11]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758