Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   U8P30_RS09825 Genome accession   NZ_CP141084
Coordinates   2076210..2077469 (+) Length   419 a.a.
NCBI ID   WP_001161827.1    Uniprot ID   A0A0H3ELU3
Organism   Escherichia coli strain KE48     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 2071210..2082469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U8P30_RS09810 (U8P30_09810) - 2071725..2073401 (+) 1677 WP_001298258.1 polysaccharide biosynthesis/export family protein -
  U8P30_RS09815 (U8P30_09815) kdsB 2073411..2074151 (+) 741 WP_000030758.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  U8P30_RS09820 (U8P30_09820) - 2074148..2076175 (+) 2028 WP_001534460.1 capsular polysaccharide biosynthesis protein -
  U8P30_RS09825 (U8P30_09825) kpsS 2076210..2077469 (+) 1260 WP_001161827.1 capsule biosynthesis protein Regulator
  U8P30_RS09830 (U8P30_09830) - 2077596..2078783 (-) 1188 Protein_1925 IS256 family transposase -
  U8P30_RS09835 (U8P30_09835) - 2079079..2079816 (-) 738 WP_000152402.1 CatB-related O-acetyltransferase -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 49880.43 Da        Isoelectric Point: 10.0395

>NTDB_id=836060 U8P30_RS09825 WP_001161827.1 2076210..2077469(+) (kpsS) [Escherichia coli strain KE48]
MQGNALTILLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRNRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWATSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKDSYLVIKHHPMDRGHRLYRPLIKRLSKEYGLDERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLVKTQVNGVYYGEMIFNKIKLD
KDFRNFSHQVGNTKANNTE

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=836060 U8P30_RS09825 WP_001161827.1 2076210..2077469(+) (kpsS) [Escherichia coli strain KE48]
ATGCAAGGCAACGCACTAACTATTTTATTATCGGGTAAAAAATATCTGCTATTGCAGGGACCGATGGGACCTTTTTTCAA
CGACGTTGCCGAATGGTTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGTGGTGATCGTTTTTACTGCC
GCAATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGTTGGTTGCGAGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCATAAAGAAGCAAAACGCTGGGCAACGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGGCGGAGTAAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGCATTGGCCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCATTTTCCCCCTGGTATGAAGCTCGTTGCTGGGTTCGTGCGTACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AAGTATTGCCGCGGTTAATGAATGAGCTGGATCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGAGATTATATTAATGAAGTCATGTACTCATTTTCGCGTAAAGCGCCAAAAGA
CAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGATTGAGTAAGG
AATATGGCTTAGATGAGCGAGTCATTTATGTGCACGATCTCCCGATGCCGGAATTATTACGCCATGCAAAAGCGGTAGTG
ACGATTAACAGTACGGCGGGGATCTCTGCGCTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGTGGGTATTTATTGGTTAAGACGCAGGTTAATGGGGTTTATTATGGGGAGATGATTTTTAACAAGATAAAACTGGAT
AAAGATTTTCGGAATTTTTCGCATCAAGTAGGAAATACAAAAGCAAATAATACAGAATAG

Domains

Predicted by InterProScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(83-389)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3ELU3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

39.394

94.511

0.372