Detailed information NTG0835969

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: U8P26_RS06375
• Genome accession: NZ_CP141083
• Coordinates: 1214070..1215053 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain KE50
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1209070..1220053

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U8P26_RS06360 (U8P26_06360)	dppA	1210214..1211821 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
U8P26_RS06365 (U8P26_06365)	dppB	1212128..1213147 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
U8P26_RS06370 (U8P26_06370)	dppC	1213157..1214059 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
U8P26_RS06375 (U8P26_06375)	amiE	1214070..1215053 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
U8P26_RS06380 (U8P26_06380)	dppF	1215050..1216054 (+)	1005	WP_000103571.1	dipeptide ABC transporter ATP-binding subunit DppF	-
U8P26_RS06385 (U8P26_06385)	yhjV	1216084..1217355 (-)	1272	WP_001296513.1	aromatic amino acid transport family protein	-
U8P26_RS06390 (U8P26_06390)	-	1217831..1217938 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
U8P26_RS06395 (U8P26_06395)	-	1218314..1218421 (+)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
U8P26_RS06400 (U8P26_06400)	-	1218797..1218904 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=835969 U8P26_RS06375 WP_001196477.1 1214070..1215053(+) (amiE) [Escherichia coli strain KE50]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=835969 U8P26_RS06375 WP_001196477.1 1214070..1215053(+) (amiE) [Escherichia coli strain KE50]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCTGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404