Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QNH41_RS07750 Genome accession   NZ_CP126100
Coordinates   1499599..1500063 (-) Length   154 a.a.
NCBI ID   WP_044156084.1    Uniprot ID   -
Organism   Bacillus halotolerans strain LN2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1494599..1505063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH41_RS07730 (QNH41_07730) kinA 1495062..1496882 (+) 1821 WP_283912955.1 sporulation histidine kinase KinA -
  QNH41_RS07735 (QNH41_07735) - 1496906..1498075 (-) 1170 WP_024121208.1 aminotransferase A -
  QNH41_RS07740 (QNH41_07740) - 1498277..1498438 (-) 162 WP_003238943.1 hypothetical protein -
  QNH41_RS07745 (QNH41_07745) cheV 1498646..1499557 (+) 912 WP_024121210.1 chemotaxis protein CheV -
  QNH41_RS07750 (QNH41_07750) kre 1499599..1500063 (-) 465 WP_044156084.1 YkyB family protein Regulator
  QNH41_RS07755 (QNH41_07755) - 1500189..1501481 (-) 1293 WP_127695343.1 MFS transporter -
  QNH41_RS07760 (QNH41_07760) - 1501557..1502051 (-) 495 WP_081638296.1 L,D-transpeptidase family protein -
  QNH41_RS07765 (QNH41_07765) - 1502109..1502969 (-) 861 WP_127695341.1 metallophosphoesterase -
  QNH41_RS07770 (QNH41_07770) fadH 1503114..1503878 (+) 765 WP_127695339.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17885.67 Da        Isoelectric Point: 10.3545

>NTDB_id=835881 QNH41_RS07750 WP_044156084.1 1499599..1500063(-) (kre) [Bacillus halotolerans strain LN2]
MDDHAYSKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVTNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=835881 QNH41_RS07750 WP_044156084.1 1499599..1500063(-) (kre) [Bacillus halotolerans strain LN2]
ATGGACGACCATGCATACTCGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACCGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTATTGCAAGAATACGTCGGCATGAAAGAAAAGCCGCTTGTGA
CGAATCGCCAGCAGCCCGCTTATCATAAGCCTGTCTTTAAGAAACTCGGCGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

98.701

100

0.987