Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QNH45_RS05985 Genome accession   NZ_CP126099
Coordinates   1159424..1159600 (+) Length   58 a.a.
NCBI ID   WP_048559636.1    Uniprot ID   -
Organism   Bacillus wiedmannii strain LN15     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1154424..1164600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH45_RS05965 (QNH45_05965) - 1156921..1157247 (-) 327 WP_283884611.1 hypothetical protein -
  QNH45_RS05970 (QNH45_05970) - 1157395..1157577 (-) 183 WP_001211113.1 YjzD family protein -
  QNH45_RS05975 (QNH45_05975) - 1157734..1158468 (+) 735 WP_048545174.1 hydrolase -
  QNH45_RS05980 (QNH45_05980) - 1158498..1159370 (+) 873 WP_283884615.1 NAD(P)-dependent oxidoreductase -
  QNH45_RS05985 (QNH45_05985) comZ 1159424..1159600 (+) 177 WP_048559636.1 ComZ family protein Regulator
  QNH45_RS05990 (QNH45_05990) fabH 1159834..1160766 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  QNH45_RS05995 (QNH45_05995) fabF 1160798..1162036 (+) 1239 WP_283884618.1 beta-ketoacyl-ACP synthase II -
  QNH45_RS06000 (QNH45_06000) - 1162142..1162930 (+) 789 WP_283884620.1 DUF2268 domain-containing putative Zn-dependent protease -
  QNH45_RS06005 (QNH45_06005) - 1163075..1163821 (+) 747 WP_000966116.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6562.75 Da        Isoelectric Point: 4.6828

>NTDB_id=835817 QNH45_RS05985 WP_048559636.1 1159424..1159600(+) (comZ) [Bacillus wiedmannii strain LN15]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMNEAYELGKAEKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=835817 QNH45_RS05985 WP_048559636.1 1159424..1159600(+) (comZ) [Bacillus wiedmannii strain LN15]
ATGAACGAAAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATCTTAGATTCGAATGG
AATTGCGCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGAAAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

94.828

0.569