Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH16_RS24470 Genome accession   NZ_CP126098
Coordinates   5048515..5049465 (-) Length   316 a.a.
NCBI ID   WP_053536781.1    Uniprot ID   A0A9X1IUS9
Organism   Peribacillus frigoritolerans strain LC22     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5043515..5054465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH16_RS24455 (QNH16_24455) - 5045664..5046611 (-) 948 WP_034310073.1 siderophore ABC transporter substrate-binding protein -
  QNH16_RS24460 (QNH16_24460) - 5046823..5047581 (-) 759 WP_034310071.1 ABC transporter ATP-binding protein -
  QNH16_RS24465 (QNH16_24465) - 5047575..5048522 (-) 948 WP_034310068.1 iron chelate uptake ABC transporter family permease subunit -
  QNH16_RS24470 (QNH16_24470) ceuB 5048515..5049465 (-) 951 WP_053536781.1 ABC transporter permease Machinery gene
  QNH16_RS24475 (QNH16_24475) - 5049731..5050072 (+) 342 WP_225991161.1 DUF1450 domain-containing protein -
  QNH16_RS24480 (QNH16_24480) - 5051639..5051770 (-) 132 WP_283866743.1 hypothetical protein -
  QNH16_RS24485 (QNH16_24485) - 5052407..5053096 (+) 690 WP_241636536.1 WxL domain-containing protein -
  QNH16_RS24490 (QNH16_24490) - 5053125..5053820 (+) 696 WP_283866744.1 WxL domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34941.26 Da        Isoelectric Point: 9.6490

>NTDB_id=835793 QNH16_RS24470 WP_053536781.1 5048515..5049465(-) (ceuB) [Peribacillus frigoritolerans strain LC22]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLNLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYLSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKFIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=835793 QNH16_RS24470 WP_053536781.1 5048515..5049465(-) (ceuB) [Peribacillus frigoritolerans strain LC22]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTCTATCGTTTACGTCATTATTCATTGGTGTAAAAGATATTACCCC
CCTGGATTTATTGAATCTAAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTCCCTAGAATGGTGACCATAGTCA
TTGCCGGTATTGTGATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTGTCCCCGACGACTGCC
GGTACCATGGACTCTGCAAGGCTGGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATCT
TCATTCCATTGGTTGGTTTGATGTTTGGTAATATCGTAGGATCGATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACATGGATGAATGGTGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATCTAAGTATCCC
GCTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGTGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGTTTATAGTCAATTTTGGATTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCGAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTGCTAGGGGCAGTCTTCCTATTGATCTGCGATATTCTGGGCAGGATCCTTATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTGATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.316

100

0.503