Detailed information NTG0835750

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QNK06_RS20490
• Genome accession: NZ_CP126097
• Coordinates: 3862766..3863911 (+)
• Length: 381 a.a.
• NCBI ID: WP_283933869.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain KF24
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3857766..3868911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNK06_RS20470 (QNK06_20470)	albF	3857782..3859062 (+)	1281	WP_283933865.1	pitrilysin family protein	-
QNK06_RS20475 (QNK06_20475)	albG	3859059..3859760 (+)	702	WP_283933866.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
QNK06_RS20480 (QNK06_20480)	ywhL	3859766..3861142 (-)	1377	WP_283933867.1	YncE family protein	-
QNK06_RS20485 (QNK06_20485)	ywhK	3861181..3862536 (-)	1356	WP_283933868.1	YncE family protein	-
QNK06_RS22425	-	3862533..3862763 (-)	231	WP_125121078.1	hypothetical protein	-
QNK06_RS20490 (QNK06_20490)	rapF	3862766..3863911 (+)	1146	WP_283933869.1	response regulator aspartate phosphatase RapF	Regulator
QNK06_RS20495 (QNK06_20495)	phrF	3863895..3864014 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
QNK06_RS20500 (QNK06_20500)	-	3864241..3864717 (+)	477	WP_015384936.1	hypothetical protein	-
QNK06_RS20505 (QNK06_20505)	-	3864977..3865663 (+)	687	WP_241495663.1	hypothetical protein	-
QNK06_RS20510 (QNK06_20510)	-	3867139..3867786 (+)	648	WP_029318689.1	ABC transporter ATP-binding protein	-
QNK06_RS20515 (QNK06_20515)	-	3867779..3868342 (+)	564	WP_283933870.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45581.98 Da
• Isoelectric Point: 4.9861

>NTDB_id=835750 QNK06_RS20490 WP_283933869.1 3862766..3863911(+) (rapF) [Bacillus subtilis strain KF24]
MTGVISSSSIGEKINEWYIYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERENFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=835750 QNK06_RS20490 WP_283933869.1 3862766..3863911(+) (rapF) [Bacillus subtilis strain KF24]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATTTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTAATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
GGGCATGTATGAACTTGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTGAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57