Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | QNK06_RS13240 | Genome accession | NZ_CP126097 |
| Coordinates | 2515661..2516698 (-) | Length | 345 a.a. |
| NCBI ID | WP_283933560.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain KF24 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2510661..2521698
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QNK06_RS13190 (QNK06_13190) | tasA | 2510758..2511543 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| QNK06_RS13195 (QNK06_13195) | sipW | 2511608..2512180 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| QNK06_RS13200 (QNK06_13200) | tapA | 2512164..2512925 (-) | 762 | WP_283933555.1 | amyloid fiber anchoring/assembly protein TapA | - |
| QNK06_RS13205 (QNK06_13205) | yqzG | 2513197..2513523 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| QNK06_RS13210 (QNK06_13210) | spoIIT | 2513565..2513744 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| QNK06_RS13215 (QNK06_13215) | comGG | 2513815..2514189 (-) | 375 | WP_283933556.1 | ComG operon protein ComGG | Machinery gene |
| QNK06_RS13220 (QNK06_13220) | comGF | 2514190..2514573 (-) | 384 | WP_283933557.1 | ComG operon protein ComGF | Machinery gene |
| QNK06_RS13225 (QNK06_13225) | comGE | 2514599..2514946 (-) | 348 | WP_283933558.1 | ComG operon protein 5 | Machinery gene |
| QNK06_RS13230 (QNK06_13230) | comGD | 2514930..2515361 (-) | 432 | WP_283933559.1 | comG operon protein ComGD | Machinery gene |
| QNK06_RS13235 (QNK06_13235) | comGC | 2515351..2515647 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| QNK06_RS13240 (QNK06_13240) | comGB | 2515661..2516698 (-) | 1038 | WP_283933560.1 | comG operon protein ComGB | Machinery gene |
| QNK06_RS13245 (QNK06_13245) | comGA | 2516685..2517755 (-) | 1071 | WP_283933561.1 | competence protein ComGA | Machinery gene |
| QNK06_RS13250 (QNK06_13250) | - | 2517966..2518163 (-) | 198 | WP_032726162.1 | hypothetical protein | - |
| QNK06_RS13255 (QNK06_13255) | corA | 2518165..2519118 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| QNK06_RS13260 (QNK06_13260) | yqhB | 2519261..2520589 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| QNK06_RS13265 (QNK06_13265) | rsbRD | 2520642..2521478 (-) | 837 | WP_283933562.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39724.12 Da Isoelectric Point: 9.6257
>NTDB_id=835722 QNK06_RS13240 WP_283933560.1 2515661..2516698(-) (comGB) [Bacillus subtilis strain KF24]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQVADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQSDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYEADFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQVADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQSDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYEADFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=835722 QNK06_RS13240 WP_283933560.1 2515661..2516698(-) (comGB) [Bacillus subtilis strain KF24]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGTGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGTCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGTAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAGCTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGTGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGTCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGTAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAGCTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
97.214 |
93.623 |
0.91 |