Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QNK06_RS07665 Genome accession   NZ_CP126097
Coordinates   1447849..1448313 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain KF24     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1442849..1453313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK06_RS07645 (QNK06_07645) kinA 1443316..1445136 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  QNK06_RS07650 (QNK06_07650) dapX 1445146..1446327 (-) 1182 WP_283934316.1 aminotransferase A -
  QNK06_RS07655 (QNK06_07655) - 1446529..1446690 (-) 162 WP_014476654.1 hypothetical protein -
  QNK06_RS07660 (QNK06_07660) cheV 1446894..1447805 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  QNK06_RS07665 (QNK06_07665) kre 1447849..1448313 (-) 465 WP_003232406.1 YkyB family protein Regulator
  QNK06_RS07670 (QNK06_07670) ykuC 1448439..1449731 (-) 1293 WP_014479656.1 MFS transporter -
  QNK06_RS07675 (QNK06_07675) ltdD 1449807..1450301 (-) 495 WP_283934464.1 L,D-transpeptidase family protein -
  QNK06_RS07680 (QNK06_07680) ppeE 1450358..1451218 (-) 861 WP_003232400.1 metallophosphoesterase -
  QNK06_RS07685 (QNK06_07685) fadH 1451361..1452125 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=835705 QNK06_RS07665 WP_003232406.1 1447849..1448313(-) (kre) [Bacillus subtilis strain KF24]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=835705 QNK06_RS07665 WP_003232406.1 1447849..1448313(-) (kre) [Bacillus subtilis strain KF24]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1