Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   QNK06_RS06210 Genome accession   NZ_CP126097
Coordinates   1189544..1190695 (+) Length   383 a.a.
NCBI ID   WP_283934239.1    Uniprot ID   -
Organism   Bacillus subtilis strain KF24     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1184544..1195695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK06_RS06175 (QNK06_06175) yjbB 1185213..1186430 (+) 1218 WP_283934460.1 MFS transporter -
  QNK06_RS06180 (QNK06_06180) yjbC 1186594..1187172 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  QNK06_RS06185 (QNK06_06185) spx 1187353..1187748 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  QNK06_RS06190 (QNK06_06190) yjbE 1187794..1188450 (-) 657 WP_003232944.1 TerC family protein -
  QNK06_RS06195 (QNK06_06195) - 1188620..1188760 (+) 141 WP_119122854.1 hypothetical protein -
  QNK06_RS06200 (QNK06_06200) mecA 1188727..1189383 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  QNK06_RS06205 (QNK06_06205) - 1189378..1189500 (-) 123 WP_161621487.1 hypothetical protein -
  QNK06_RS06210 (QNK06_06210) coiA 1189544..1190695 (+) 1152 WP_283934239.1 competence protein CoiA Machinery gene
  QNK06_RS06215 (QNK06_06215) pepF 1190925..1192754 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  QNK06_RS06220 (QNK06_06220) - 1192792..1192959 (-) 168 WP_003244944.1 hypothetical protein -
  QNK06_RS06225 (QNK06_06225) spxH 1193274..1194173 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  QNK06_RS06230 (QNK06_06230) yjbI 1194170..1194568 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  QNK06_RS06235 (QNK06_06235) cwlQ 1194823..1195557 (-) 735 WP_283934240.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44875.95 Da        Isoelectric Point: 9.9417

>NTDB_id=835701 QNK06_RS06210 WP_283934239.1 1189544..1190695(+) (coiA) [Bacillus subtilis strain KF24]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSFQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=835701 QNK06_RS06210 WP_283934239.1 1189544..1190695(+) (coiA) [Bacillus subtilis strain KF24]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAATCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATTAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCATTTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.391

97.389

0.958