Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QNK06_RS04545 Genome accession   NZ_CP126097
Coordinates   883014..883808 (+) Length   264 a.a.
NCBI ID   WP_283934170.1    Uniprot ID   -
Organism   Bacillus subtilis strain KF24     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 878014..888808
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK06_RS04515 (QNK06_04515) sxzA 878854..879885 (+) 1032 WP_283934168.1 iron ABC transporter permease -
  QNK06_RS04520 (QNK06_04520) yfhB 880000..880881 (+) 882 WP_283934169.1 PhzF family phenazine biosynthesis isomerase -
  QNK06_RS04525 (QNK06_04525) yfhC 880969..881553 (+) 585 WP_003243940.1 nitroreductase -
  QNK06_RS04530 (QNK06_04530) yfhD 881592..881783 (-) 192 WP_003233561.1 YfhD family protein -
  QNK06_RS04535 (QNK06_04535) yfhE 881850..881960 (-) 111 WP_003223230.1 YfhE family protein -
  QNK06_RS04540 (QNK06_04540) yfhF 882014..882925 (-) 912 WP_161986661.1 TIGR01777 family oxidoreductase -
  QNK06_RS04545 (QNK06_04545) recX 883014..883808 (+) 795 WP_283934170.1 recombination regulator RecX Regulator
  QNK06_RS04550 (QNK06_04550) yfhH 883810..884124 (+) 315 WP_003244592.1 YfhH family protein -
  QNK06_RS04555 (QNK06_04555) yfhI 884267..885460 (+) 1194 WP_080474520.1 MFS transporter -
  QNK06_RS04560 (QNK06_04560) sspK 885492..885644 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  QNK06_RS04565 (QNK06_04565) yfhJ 885769..886038 (+) 270 WP_003243789.1 YfhJ family protein -
  QNK06_RS04570 (QNK06_04570) yfhK 886183..886701 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  QNK06_RS04575 (QNK06_04575) spdL 886786..887118 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  QNK06_RS04580 (QNK06_04580) ephM 887105..887965 (+) 861 WP_003233547.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31033.29 Da        Isoelectric Point: 6.5251

>NTDB_id=835688 QNK06_RS04545 WP_283934170.1 883014..883808(+) (recX) [Bacillus subtilis strain KF24]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDYLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQIRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=835688 QNK06_RS04545 WP_283934170.1 883014..883808(+) (recX) [Bacillus subtilis strain KF24]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACTATTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGATAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATAAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

98.864

100

0.989