Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   QNH34_RS15310 Genome accession   NZ_CP126096
Coordinates   2929879..2930019 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus altitudinis strain G6S2     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2924879..2935019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH34_RS15285 (QNH34_15285) - 2925145..2925534 (-) 390 WP_017358943.1 hotdog fold thioesterase -
  QNH34_RS15290 (QNH34_15290) comA 2925558..2926199 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  QNH34_RS15295 (QNH34_15295) comP 2926280..2928592 (-) 2313 WP_041507704.1 ATP-binding protein Regulator
  QNH34_RS15300 (QNH34_15300) comX 2928646..2928816 (-) 171 WP_074041927.1 competence pheromone ComX -
  QNH34_RS15305 (QNH34_15305) - 2928813..2929727 (-) 915 WP_168948551.1 polyprenyl synthetase family protein -
  QNH34_RS15310 (QNH34_15310) degQ 2929879..2930019 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  QNH34_RS15315 (QNH34_15315) - 2930525..2930878 (+) 354 WP_017367963.1 hypothetical protein -
  QNH34_RS15320 (QNH34_15320) - 2930915..2932141 (-) 1227 WP_283933443.1 HDOD domain-containing protein -
  QNH34_RS15325 (QNH34_15325) - 2932282..2933751 (-) 1470 WP_007500472.1 nicotinate phosphoribosyltransferase -
  QNH34_RS15330 (QNH34_15330) - 2933769..2934320 (-) 552 WP_008345872.1 isochorismatase family cysteine hydrolase -
  QNH34_RS15335 (QNH34_15335) - 2934381..2934788 (-) 408 WP_007500468.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=835662 QNH34_RS15310 WP_003213123.1 2929879..2930019(-) (degQ) [Bacillus altitudinis strain G6S2]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=835662 QNH34_RS15310 WP_003213123.1 2929879..2930019(-) (degQ) [Bacillus altitudinis strain G6S2]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAACTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696