Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QNH34_RS07015 Genome accession   NZ_CP126096
Coordinates   1384220..1384801 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain G6S2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1379220..1389801
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH34_RS06990 (QNH34_06990) - 1379884..1381062 (+) 1179 WP_045034211.1 N-acetyldiaminopimelate deacetylase -
  QNH34_RS06995 (QNH34_06995) - 1381113..1381355 (+) 243 WP_024424725.1 YkuS family protein -
  QNH34_RS07000 (QNH34_07000) - 1381380..1382189 (-) 810 WP_041507374.1 mechanosensitive ion channel family protein -
  QNH34_RS07005 (QNH34_07005) ahpA 1382461..1383003 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  QNH34_RS07010 (QNH34_07010) - 1383280..1383738 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  QNH34_RS07015 (QNH34_07015) rok 1384220..1384801 (+) 582 WP_007498648.1 hypothetical protein Regulator
  QNH34_RS07020 (QNH34_07020) - 1384864..1385781 (-) 918 WP_079920060.1 sigmaE regulated sporulation protein -
  QNH34_RS07025 (QNH34_07025) - 1385865..1386446 (+) 582 WP_019743805.1 molybdenum cofactor guanylyltransferase -
  QNH34_RS07030 (QNH34_07030) - 1386476..1387492 (+) 1017 WP_045034214.1 thiazole biosynthesis adenylyltransferase ThiF -
  QNH34_RS07035 (QNH34_07035) glp 1387502..1388776 (+) 1275 WP_251185371.1 gephyrin-like molybdotransferase Glp -
  QNH34_RS07040 (QNH34_07040) mobB 1388758..1389285 (+) 528 WP_045034297.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  QNH34_RS07045 (QNH34_07045) - 1389278..1389769 (+) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=835638 QNH34_RS07015 WP_007498648.1 1384220..1384801(+) (rok) [Bacillus altitudinis strain G6S2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=835638 QNH34_RS07015 WP_007498648.1 1384220..1384801(+) (rok) [Bacillus altitudinis strain G6S2]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCATTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782