Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QNH34_RS06895 Genome accession   NZ_CP126096
Coordinates   1365575..1366036 (-) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus altitudinis strain G6S2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1360575..1371036
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH34_RS06870 (QNH34_06870) - 1360637..1360789 (-) 153 WP_017367142.1 hypothetical protein -
  QNH34_RS06875 (QNH34_06875) - 1361090..1361629 (+) 540 WP_039169112.1 RDD family protein -
  QNH34_RS06885 (QNH34_06885) - 1363044..1364354 (+) 1311 WP_205831395.1 MFS transporter -
  QNH34_RS06890 (QNH34_06890) - 1364428..1365336 (+) 909 WP_024719666.1 chemotaxis protein -
  QNH34_RS06895 (QNH34_06895) kre 1365575..1366036 (-) 462 WP_007498684.1 YkyB family protein Regulator
  QNH34_RS06900 (QNH34_06900) - 1366514..1366729 (-) 216 WP_008348016.1 hypothetical protein -
  QNH34_RS06905 (QNH34_06905) - 1366897..1367073 (+) 177 WP_165783671.1 hypothetical protein -
  QNH34_RS06910 (QNH34_06910) - 1367302..1368579 (-) 1278 WP_008348012.1 MFS transporter -
  QNH34_RS06915 (QNH34_06915) - 1368653..1369150 (-) 498 WP_008348009.1 L,D-transpeptidase family protein -
  QNH34_RS06920 (QNH34_06920) - 1369307..1370164 (-) 858 WP_045034208.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=835637 QNH34_RS06895 WP_007498684.1 1365575..1366036(-) (kre) [Bacillus altitudinis strain G6S2]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=835637 QNH34_RS06895 WP_007498684.1 1365575..1366036(-) (kre) [Bacillus altitudinis strain G6S2]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATCGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAATCGAGCAAAACAAATTCTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771