Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   QNH31_RS14055 Genome accession   NZ_CP126094
Coordinates   2706713..2707459 (-) Length   248 a.a.
NCBI ID   WP_080332541.1    Uniprot ID   -
Organism   Bacillus subtilis strain G2S2     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2701713..2712459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH31_RS14030 (QNH31_14030) mreC 2702118..2702990 (-) 873 WP_009967915.1 rod shape-determining protein MreC -
  QNH31_RS14035 (QNH31_14035) mreB 2703021..2704034 (-) 1014 WP_003229650.1 cell shape-determining protein MreB -
  QNH31_RS14040 (QNH31_14040) radC 2704126..2704821 (-) 696 WP_041850180.1 DNA repair protein RadC -
  QNH31_RS14045 (QNH31_14045) maf 2704858..2705427 (-) 570 WP_004398496.1 Maf family nucleotide pyrophosphatase -
  QNH31_RS14050 (QNH31_14050) spoIIB 2705581..2706579 (-) 999 WP_041850181.1 stage II sporulation protein SpoIIB -
  QNH31_RS14055 (QNH31_14055) comC 2706713..2707459 (-) 747 WP_080332541.1 A24 family peptidase Machinery gene
  QNH31_RS14060 (QNH31_14060) folC 2707599..2708891 (-) 1293 WP_041339279.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  QNH31_RS14065 (QNH31_14065) valS 2708951..2711593 (-) 2643 WP_041850183.1 valine--tRNA ligase -
  QNH31_RS14070 (QNH31_14070) - 2712041..2712232 (+) 192 WP_003222590.1 hypothetical protein -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 26437.01 Da        Isoelectric Point: 9.7944

>NTDB_id=835559 QNH31_RS14055 WP_080332541.1 2706713..2707459(-) (comC) [Bacillus subtilis strain G2S2]
MLSILFIFGLILGSFYYTAGCRIPLHLSIIAPRSSCPFCRRTLTPAELIPILSFLFQKGKCKSCGHRISFMYPAAELVTA
CLFAAAGIRFGTSLELFPAVVFISLLIIVAVTDIHFMLIPNRILIFFLPFLAAARLISPLDTWYAGLLGAAAGFLFLAVI
AAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALG

Nucleotide


Download         Length: 747 bp        

>NTDB_id=835559 QNH31_RS14055 WP_080332541.1 2706713..2707459(-) (comC) [Bacillus subtilis strain G2S2]
ATGCTATCCATTCTTTTTATCTTCGGGCTGATCCTTGGTTCTTTTTACTATACGGCCGGGTGCCGTATCCCCTTACATCT
ATCTATTATTGCGCCCCGTTCATCATGCCCGTTTTGCCGGCGGACATTAACTCCTGCAGAATTAATTCCCATCCTGTCAT
TCCTATTTCAAAAAGGTAAATGTAAAAGCTGCGGGCATAGGATTTCTTTTATGTATCCCGCAGCAGAGCTTGTGACAGCG
TGTTTATTTGCCGCCGCAGGAATACGCTTTGGCACGTCGCTGGAACTGTTTCCCGCTGTGGTGTTTATCTCTCTTCTCAT
TATTGTTGCAGTGACAGATATTCATTTTATGCTGATTCCAAATCGAATATTGATTTTCTTTCTTCCCTTTTTGGCGGCCG
CGAGATTGATTTCTCCGCTTGATACCTGGTATGCAGGCCTGTTAGGTGCGGCAGCCGGATTTCTGTTTCTGGCTGTAATT
GCCGCAATCACCCATGGGGGAGTAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTGCTTGGTGTGAAGAT
GCTGGCAGCTGCCTTTTTCTTTTCTGTTTTGATAGGTGCATTATATGGAGCGGCAGCTGTTCTGACTGGTAGACTCGCTA
AAAGGCAGCCGCTTCCCTTCGCCCCCGCTATAGCCGCAGGGAGCATTTTAGCCTATTTATACGGTGACTCTATCATTTCT
TTTTATATCAAAATGGCATTGGGCTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-90)

Type IV leader peptidase family (Peptidase_A24)

(101-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

99.194

100

0.992