Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   QNH31_RS07765 Genome accession   NZ_CP126094
Coordinates   1484365..1484643 (+) Length   92 a.a.
NCBI ID   WP_003244728.1    Uniprot ID   A0A199WGU6
Organism   Bacillus subtilis strain G2S2     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 1479365..1489643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH31_RS07745 (QNH31_07745) - 1480553..1481464 (+) 912 WP_041850871.1 ketopantoate reductase family protein -
  QNH31_RS07750 (QNH31_07750) ampS 1481498..1482730 (-) 1233 WP_041850870.1 aminopeptidase -
  QNH31_RS07755 (QNH31_07755) ykpC 1482839..1482973 (-) 135 WP_003238865.1 protein YkpC -
  QNH31_RS07760 (QNH31_07760) mreBH 1483074..1484081 (-) 1008 WP_003245743.1 cell shape-determining protein MreBH -
  QNH31_RS07765 (QNH31_07765) abrB 1484365..1484643 (+) 279 WP_003244728.1 transcriptional regulator AbhA Regulator
  QNH31_RS07770 (QNH31_07770) kinC 1484833..1486119 (+) 1287 WP_021479369.1 two-component sensor histidine kinase KinC -
  QNH31_RS07775 (QNH31_07775) ykqA 1486135..1486962 (+) 828 WP_041850869.1 gamma-glutamylcyclotransferase -
  QNH31_RS07780 (QNH31_07780) ktrC 1487025..1487690 (+) 666 WP_003222311.1 Ktr system potassium transporter KtrC -
  QNH31_RS07785 (QNH31_07785) ade 1487846..1489579 (+) 1734 WP_041850868.1 adenine deaminase -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 10256.07 Da        Isoelectric Point: 5.8808

>NTDB_id=835533 QNH31_RS07765 WP_003244728.1 1484365..1484643(+) (abrB) [Bacillus subtilis strain G2S2]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide


Download         Length: 279 bp        

>NTDB_id=835533 QNH31_RS07765 WP_003244728.1 1484365..1484643(+) (abrB) [Bacillus subtilis strain G2S2]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGGGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-88)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WGU6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

58.242

98.913

0.576