Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH29_RS02660 Genome accession   NZ_CP126093
Coordinates   560846..561796 (+) Length   316 a.a.
NCBI ID   WP_283863318.1    Uniprot ID   A0AA95L883
Organism   Neobacillus sp. DY30     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 555846..566796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH29_RS02635 (QNH29_02635) - 556599..558371 (-) 1773 WP_283863313.1 ABC transporter ATP-binding protein -
  QNH29_RS02640 (QNH29_02640) - 558496..558858 (+) 363 WP_283863314.1 multidrug efflux SMR transporter -
  QNH29_RS02645 (QNH29_02645) - 558858..559172 (+) 315 WP_283863315.1 multidrug efflux SMR transporter -
  QNH29_RS02650 (QNH29_02650) - 559211..559678 (-) 468 WP_283863316.1 redoxin domain-containing protein -
  QNH29_RS02655 (QNH29_02655) - 559778..560521 (-) 744 WP_283863317.1 C39 family peptidase -
  QNH29_RS02660 (QNH29_02660) ceuB 560846..561796 (+) 951 WP_283863318.1 ABC transporter permease Machinery gene
  QNH29_RS02665 (QNH29_02665) - 561789..562739 (+) 951 WP_283863319.1 iron chelate uptake ABC transporter family permease subunit -
  QNH29_RS02670 (QNH29_02670) - 562736..563497 (+) 762 WP_283863320.1 ABC transporter ATP-binding protein -
  QNH29_RS02675 (QNH29_02675) - 563516..564463 (+) 948 WP_283863321.1 siderophore ABC transporter substrate-binding protein -
  QNH29_RS02680 (QNH29_02680) - 564513..564818 (+) 306 WP_283863322.1 antibiotic biosynthesis monooxygenase -
  QNH29_RS02685 (QNH29_02685) - 564886..565371 (-) 486 WP_283863323.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34786.02 Da        Isoelectric Point: 10.1149

>NTDB_id=835454 QNH29_RS02660 WP_283863318.1 560846..561796(+) (ceuB) [Neobacillus sp. DY30]
MKKRFLLLALLVLSAASLFVGVSSISPLDLLDFQSEETQIFLISRLPRLVAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANATMLEKMAVAFVFALAGTFVFMQILDRIKFKDAIFIPLVGLMFGNILSSVTTFFAYRADVI
QNMSAWLQGDFSMIMKGRYELLYISIPILIIAYFYANRFTVAGMGEDFSKNLGLAYRRIVNIGLILVALVTTTVVLTVGI
IPFLGLIIPNIISIFKGDHLQKTLPHTALLGAIFLLICDILGRVLIYPYEISISLMVGVIGSGIFLYLLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=835454 QNH29_RS02660 WP_283863318.1 560846..561796(+) (ceuB) [Neobacillus sp. DY30]
ATGAAAAAAAGATTTTTACTGCTAGCATTACTAGTCTTATCTGCTGCTTCCTTATTTGTCGGGGTTAGCAGTATATCACC
ATTGGACTTGTTAGATTTCCAATCAGAGGAGACGCAAATATTCCTTATCAGCAGACTTCCAAGGCTTGTTGCGATATTAC
TGGCAGGAGCGGGGATGAGTATTGCTGGCTTAATCATGCAGCAACTTAGCAGGAACAAATTTGTTTCACCGACCACCGCA
GGAACCCTAGATGCAACTAGGCTGGGTATCCTTGTCTCAATGCTTTTGTTTGCAAATGCAACCATGCTTGAAAAGATGGC
AGTAGCCTTTGTTTTTGCGCTTGCTGGTACGTTTGTTTTTATGCAAATTCTTGATCGAATAAAGTTTAAGGATGCTATTT
TCATACCGCTTGTAGGTTTAATGTTTGGAAATATCTTGTCCTCTGTGACGACTTTTTTCGCTTATCGTGCTGACGTCATT
CAAAACATGTCTGCTTGGCTGCAGGGTGATTTTTCAATGATTATGAAGGGCAGATACGAATTACTCTACATAAGTATTCC
GATTTTAATTATTGCTTATTTCTATGCAAACCGCTTTACAGTAGCCGGAATGGGGGAAGACTTTTCAAAAAACCTTGGAC
TTGCGTATCGCCGGATAGTGAATATTGGTCTTATCCTTGTTGCACTCGTAACGACAACGGTAGTTTTAACTGTCGGAATT
ATCCCGTTTTTAGGCTTAATTATTCCAAATATCATATCGATTTTTAAAGGCGATCATTTGCAAAAAACATTGCCGCATAC
AGCACTCCTTGGGGCCATCTTCCTTCTGATTTGCGATATATTGGGCAGGGTGCTCATTTATCCATATGAAATTTCAATCA
GCCTGATGGTTGGGGTAATTGGAAGCGGAATTTTCTTATACTTACTGTTCCGGAGGAAGGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.355

99.051

0.528