Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH21_RS05175 Genome accession   NZ_CP126090
Coordinates   1062382..1063332 (+) Length   316 a.a.
NCBI ID   WP_283859990.1    Uniprot ID   -
Organism   Bacillus safensis strain CEW AP102     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1057382..1068332
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH21_RS05150 (QNH21_05150) comK 1057730..1058308 (+) 579 WP_024425481.1 competence protein ComK Regulator
  QNH21_RS05155 (QNH21_05155) - 1058608..1059090 (+) 483 WP_024425482.1 hypothetical protein -
  QNH21_RS05160 (QNH21_05160) - 1059121..1060560 (-) 1440 WP_283859989.1 PLP-dependent aminotransferase family protein -
  QNH21_RS05165 (QNH21_05165) - 1060706..1061875 (+) 1170 WP_024425484.1 MFS transporter -
  QNH21_RS05170 (QNH21_05170) - 1061941..1062219 (+) 279 WP_024425485.1 barstar family protein -
  QNH21_RS05175 (QNH21_05175) ceuB 1062382..1063332 (+) 951 WP_283859990.1 ABC transporter permease Machinery gene
  QNH21_RS05180 (QNH21_05180) - 1063325..1064275 (+) 951 WP_024425487.1 iron chelate uptake ABC transporter family permease subunit -
  QNH21_RS05185 (QNH21_05185) - 1064266..1065024 (+) 759 WP_283859991.1 ATP-binding cassette domain-containing protein -
  QNH21_RS05190 (QNH21_05190) - 1065046..1065990 (+) 945 WP_185854218.1 siderophore ABC transporter substrate-binding protein -
  QNH21_RS05195 (QNH21_05195) - 1066128..1067081 (+) 954 WP_024425490.1 LCP family protein -
  QNH21_RS05200 (QNH21_05200) - 1067153..1067515 (-) 363 WP_024425491.1 hypothetical protein -
  QNH21_RS05205 (QNH21_05205) - 1067671..1068288 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34978.37 Da        Isoelectric Point: 9.7476

>NTDB_id=835277 QNH21_RS05175 WP_283859990.1 1062382..1063332(+) (ceuB) [Bacillus safensis strain CEW AP102]
MKLYQLSLFFVCLACISLFVGVQDLSILQLFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMEWAKLGILVAMLVFTHVNPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKGLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=835277 QNH21_RS05175 WP_283859990.1 1062382..1063332(+) (ceuB) [Bacillus safensis strain CEW AP102]
ATGAAATTGTATCAATTAAGTTTGTTTTTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGTCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGAGTGGGCGAAGCTTGGTATTTTAGTAGCAATGCTTGTTTTTACACATGTGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGAGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCCGTTAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGAATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTTTCGATCTACCGCGGCGATCACTTGAAAAAAGGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GACTCATGGTAGGCATCATCGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.318

99.367

0.5