Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH26_RS24835 Genome accession   NZ_CP126089
Coordinates   5049759..5050709 (-) Length   316 a.a.
NCBI ID   WP_053536781.1    Uniprot ID   A0A9X1IUS9
Organism   Peribacillus frigoritolerans strain CF29     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5044759..5055709
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH26_RS24820 (QNH26_24820) - 5046910..5047857 (-) 948 WP_278088642.1 siderophore ABC transporter substrate-binding protein -
  QNH26_RS24825 (QNH26_24825) - 5048067..5048825 (-) 759 WP_034310071.1 ABC transporter ATP-binding protein -
  QNH26_RS24830 (QNH26_24830) - 5048819..5049766 (-) 948 WP_034310068.1 iron chelate uptake ABC transporter family permease subunit -
  QNH26_RS24835 (QNH26_24835) ceuB 5049759..5050709 (-) 951 WP_053536781.1 ABC transporter permease Machinery gene
  QNH26_RS24840 (QNH26_24840) - 5050954..5051316 (+) 363 WP_283929603.1 DUF1450 domain-containing protein -
  QNH26_RS24845 (QNH26_24845) - 5053186..5053842 (+) 657 WP_283929604.1 WxL domain-containing protein -
  QNH26_RS24850 (QNH26_24850) - 5053871..5054566 (+) 696 WP_268563802.1 WxL domain-containing protein -
  QNH26_RS24855 (QNH26_24855) - 5054662..5055687 (+) 1026 WP_283929605.1 DUF916 and DUF3324 domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34941.26 Da        Isoelectric Point: 9.6490

>NTDB_id=835250 QNH26_RS24835 WP_053536781.1 5049759..5050709(-) (ceuB) [Peribacillus frigoritolerans strain CF29]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLNLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYLSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKFIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=835250 QNH26_RS24835 WP_053536781.1 5049759..5050709(-) (ceuB) [Peribacillus frigoritolerans strain CF29]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTTTATCATTTACGTCATTATTCATTGGTGTAAAAGATATTACCCC
CCTGGATTTATTGAATCTAAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTCCCTAGAATGGTGACCATAGTCA
TTGCCGGTATTGTGATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTGTCCCCGACGACTGCC
GGTACCATGGACTCTGCAAGGCTGGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATCT
TCATTCCATTGGTTGGTTTGATGTTTGGTAATATCGTAGGATCGATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACATGGATGAATGGTGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATCTGAGTATCCC
GCTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGAGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGTTCATAGTCAATTTTGGATTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCAAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTGCTAGGGGCAGTCTTCCTATTGATCTGCGATATTCTGGGCAGGATCCTTATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTGATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.316

100

0.503