Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QNH25_RS06910 Genome accession   NZ_CP126087
Coordinates   1385102..1385674 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus safensis strain CEW-AP100     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1380102..1390674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH25_RS06880 (QNH25_06880) dapD 1380217..1380927 (+) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QNH25_RS06885 (QNH25_06885) - 1381010..1382140 (+) 1131 WP_098676853.1 N-acetyldiaminopimelate deacetylase -
  QNH25_RS06890 (QNH25_06890) - 1382191..1382433 (+) 243 WP_024424725.1 YkuS family protein -
  QNH25_RS06895 (QNH25_06895) - 1382456..1383265 (-) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  QNH25_RS06900 (QNH25_06900) ahpA 1383538..1384080 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  QNH25_RS06905 (QNH25_06905) - 1384163..1384621 (+) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  QNH25_RS06910 (QNH25_06910) rok 1385102..1385674 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  QNH25_RS06915 (QNH25_06915) - 1385723..1386640 (-) 918 WP_034623329.1 hypothetical protein -
  QNH25_RS06920 (QNH25_06920) - 1386726..1387307 (+) 582 WP_185854370.1 molybdenum cofactor guanylyltransferase -
  QNH25_RS06925 (QNH25_06925) - 1387338..1388354 (+) 1017 WP_185854371.1 thiazole biosynthesis adenylyltransferase ThiF -
  QNH25_RS06930 (QNH25_06930) glp 1388364..1389641 (+) 1278 WP_185854372.1 gephyrin-like molybdotransferase Glp -
  QNH25_RS06935 (QNH25_06935) mobB 1389623..1390147 (+) 525 WP_073208298.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  QNH25_RS06940 (QNH25_06940) - 1390144..1390635 (+) 492 WP_073205015.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=835120 QNH25_RS06910 WP_024426871.1 1385102..1385674(+) (rok) [Bacillus safensis strain CEW-AP100]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=835120 QNH25_RS06910 WP_024426871.1 1385102..1385674(+) (rok) [Bacillus safensis strain CEW-AP100]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAACTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGTGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8