Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QNH25_RS06775 Genome accession   NZ_CP126087
Coordinates   1364410..1364871 (-) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus safensis strain CEW-AP100     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1359410..1369871
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH25_RS06750 (QNH25_06750) - 1360012..1360896 (+) 885 WP_133743879.1 cation diffusion facilitator family transporter -
  QNH25_RS06755 (QNH25_06755) - 1360961..1361113 (-) 153 WP_162842519.1 hypothetical protein -
  QNH25_RS06760 (QNH25_06760) - 1361415..1361954 (+) 540 WP_024424707.1 RDD family protein -
  QNH25_RS06765 (QNH25_06765) - 1362080..1363390 (+) 1311 WP_024424708.1 MFS transporter -
  QNH25_RS06770 (QNH25_06770) - 1363464..1364372 (+) 909 WP_024424709.1 chemotaxis protein -
  QNH25_RS06775 (QNH25_06775) kre 1364410..1364871 (-) 462 WP_008356877.1 YkyB family protein Regulator
  QNH25_RS06785 (QNH25_06785) - 1365400..1365576 (+) 177 WP_166644676.1 hypothetical protein -
  QNH25_RS06790 (QNH25_06790) - 1365704..1366621 (-) 918 WP_122631271.1 AraC family transcriptional regulator -
  QNH25_RS06795 (QNH25_06795) - 1366735..1367646 (+) 912 WP_283860047.1 DMT family transporter -
  QNH25_RS06800 (QNH25_06800) - 1367783..1367998 (-) 216 WP_024424712.1 hypothetical protein -
  QNH25_RS06805 (QNH25_06805) - 1368247..1369524 (-) 1278 WP_283860048.1 MFS transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=835119 QNH25_RS06775 WP_008356877.1 1364410..1364871(-) (kre) [Bacillus safensis strain CEW-AP100]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=835119 QNH25_RS06775 WP_008356877.1 1364410..1364871(-) (kre) [Bacillus safensis strain CEW-AP100]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGCGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACGAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTACACAAAACCCGTCTTCAAACGTCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765