Detailed information NTG0835111

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: QNH25_RS05550
• Genome accession: NZ_CP126087
• Coordinates: 1141044..1142006 (+)
• Length: 320 a.a.
• NCBI ID: WP_024425055.1
• Uniprot ID: -
• Organism: Bacillus safensis strain CEW-AP100
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1136044..1147006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH25_RS05520 (QNH25_05520)	argF	1136383..1137333 (+)	951	WP_151039268.1	ornithine carbamoyltransferase	-
QNH25_RS05525 (QNH25_05525)	-	1137436..1137615 (+)	180	WP_008348517.1	YjzC family protein	-
QNH25_RS05530 (QNH25_05530)	-	1137779..1139044 (+)	1266	WP_034282089.1	MFS transporter	-
QNH25_RS05535 (QNH25_05535)	-	1139156..1139350 (-)	195	WP_003211779.1	YjzD family protein	-
QNH25_RS05540 (QNH25_05540)	-	1139563..1140303 (+)	741	WP_024425057.1	hypothetical protein	-
QNH25_RS05545 (QNH25_05545)	-	1140377..1140952 (+)	576	WP_283860006.1	nad binding enzyme	-
QNH25_RS05550 (QNH25_05550)	med	1141044..1142006 (+)	963	WP_024425055.1	BMP family ABC transporter substrate-binding protein	Regulator
QNH25_RS05555 (QNH25_05555)	comZ	1142019..1142216 (+)	198	WP_024425054.1	ComZ family protein	Regulator
QNH25_RS05560 (QNH25_05560)	-	1142227..1142460 (-)	234	WP_024426489.1	hypothetical protein	-
QNH25_RS05565 (QNH25_05565)	-	1142632..1143570 (+)	939	WP_283860007.1	beta-ketoacyl-ACP synthase III	-
QNH25_RS05570 (QNH25_05570)	fabF	1143592..1144833 (+)	1242	WP_024425051.1	beta-ketoacyl-ACP synthase II	-
QNH25_RS05575 (QNH25_05575)	-	1144911..1145714 (+)	804	WP_024425050.1	DUF2268 domain-containing protein	-
QNH25_RS05580 (QNH25_05580)	-	1145864..1146844 (+)	981	WP_024426488.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35639.48 Da
• Isoelectric Point: 5.0003

>NTDB_id=835111 QNH25_RS05550 WP_024425055.1 1141044..1142006(+) (med) [Bacillus safensis strain CEW-AP100]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVVEMGKFSSTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=835111 QNH25_RS05550 WP_024425055.1 1141044..1142006(+) (med) [Bacillus safensis strain CEW-AP100]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGTGAAATTTTTAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGGCAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGAGCAAAATATCAAGATGAACATGTACAAGTATTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTTGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGGTACGTCACCGATCAATCC
AACCTCGGCAGCCATACAGTTTTAACGAGCACTGTACAGCATGTTGATAAAGCGTATAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGATGAGTACTCCTTTGATTTTAAAGAAGGAGTGGTCGAGATGGGGAAATTTAGTTCCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCATACAAAAAAACAGGTAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.537	97.813	0.631