Detailed information NTG0835072

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: SPG78_RS07310
• Genome accession: NZ_CP140483
• Coordinates: 1504912..1506345 (-)
• Length: 477 a.a.
• NCBI ID: WP_000751688.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 51N
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1499912..1511345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPG78_RS07285	recG	1501047..1502912 (-)	1866	WP_001158394.1	ATP-dependent DNA helicase RecG	-
SPG78_RS07290	-	1502994..1503347 (+)	354	WP_000837003.1	hypothetical protein	-
SPG78_RS07295	-	1503351..1503986 (+)	636	WP_000668030.1	outer membrane protein	-
SPG78_RS07300	-	1503983..1504735 (-)	753	WP_000767536.1	exodeoxyribonuclease III	-
SPG78_RS07310	comH	1504912..1506345 (-)	1434	WP_000751688.1	hypothetical protein	Machinery gene
SPG78_RS07315	dnaA	1506567..1507934 (-)	1368	WP_000380587.1	chromosomal replication initiator protein DnaA	-
SPG78_RS07320	-	1508086..1508622 (+)	537	WP_014537411.1	purine-nucleoside phosphorylase	-
SPG78_RS07325	-	1508669..1508908 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
SPG78_RS07330	glmS	1508909..1510702 (+)	1794	WP_000334405.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54740.72 Da
• Isoelectric Point: 7.2025

>NTDB_id=835072 SPG78_RS07310 WP_000751688.1 1504912..1506345(-) (comH) [Helicobacter pylori strain 51N]
MKKTLCLSFFLTFSNPLQALVIELLEEVKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLEMILNPNRPTIPRNTQIVFSSKELKEPHQMPSLNAPIQKPQNKPTSSQQSLQNFPYTESKLGSKNPKNSLLQPLAT
PNKISSANEVKTPTNDTKPPLKHSSEDQENNLFVAPPTEKTLPNNTPNANINEHNESNENRDSVEKQAIRDPNVKEFACG
KWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKATYERPKQDDQTEPTFYETSELAYSSTRKSEITHNELNL
NEKFMEFVEVYERHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=835072 SPG78_RS07310 WP_000751688.1 1504912..1506345(-) (comH) [Helicobacter pylori strain 51N]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AGTCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAATGATCTTAAACCCTAACCGCCCTACTATTCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCCACACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTTCATCGCAACAAT
CTCTTCAAAACTTTCCTTACACAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTAGCCACT
CCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACACCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTCAGAAGA
TCAAGAAAACAACCTCTTTGTAGCACCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTAATATTAATGAAC
ACAATGAAAGCAATGAAAATAGGGATAGTGTGGAAAAACAAGCGATTAGAGATCCTAATGTTAAAGAATTTGCGTGCGGG
AAGTGGGTCTATGATGATGAAAATCTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGC
GACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGAGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTCATAGAAGAGCCTTTAAAACA
AGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCACTTATGAGCGCCCCAAACAAGACGATCAAACAG
AGCCGACTTTCTATGAAACTAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGAGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCCAAAA
GCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.649	100	0.92