Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QNH40_RS05705 Genome accession   NZ_CP126086
Coordinates   1143114..1143311 (+) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain CES-OCA-19     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1138114..1148311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH40_RS05675 (QNH40_05675) - 1138514..1138693 (+) 180 WP_008348517.1 YjzC family protein -
  QNH40_RS05680 (QNH40_05680) - 1138863..1140128 (+) 1266 WP_007499050.1 MFS transporter -
  QNH40_RS05685 (QNH40_05685) - 1140248..1140442 (-) 195 WP_008348514.1 YjzD family protein -
  QNH40_RS05690 (QNH40_05690) - 1140655..1141395 (+) 741 WP_052320253.1 hypothetical protein -
  QNH40_RS05695 (QNH40_05695) - 1141471..1142046 (+) 576 WP_052320252.1 hypothetical protein -
  QNH40_RS05700 (QNH40_05700) med 1142137..1143102 (+) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  QNH40_RS05705 (QNH40_05705) comZ 1143114..1143311 (+) 198 WP_008348507.1 ComZ family protein Regulator
  QNH40_RS05710 (QNH40_05710) - 1143514..1143747 (-) 234 WP_108611364.1 hypothetical protein -
  QNH40_RS05715 (QNH40_05715) - 1143917..1144855 (+) 939 WP_007499042.1 beta-ketoacyl-ACP synthase III -
  QNH40_RS05720 (QNH40_05720) fabF 1144877..1146118 (+) 1242 WP_007499040.1 beta-ketoacyl-ACP synthase II -
  QNH40_RS05725 (QNH40_05725) - 1146196..1146990 (+) 795 WP_008348499.1 DUF2268 domain-containing protein -
  QNH40_RS05730 (QNH40_05730) - 1147161..1148141 (+) 981 WP_008348498.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=835051 QNH40_RS05705 WP_008348507.1 1143114..1143311(+) (comZ) [Bacillus altitudinis strain CES-OCA-19]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=835051 QNH40_RS05705 WP_008348507.1 1143114..1143311(+) (comZ) [Bacillus altitudinis strain CES-OCA-19]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCACTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662