Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH40_RS05320 Genome accession   NZ_CP126086
Coordinates   1061881..1062831 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain CES-OCA-19     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1056881..1067831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH40_RS05300 (QNH40_05300) - 1058116..1058598 (+) 483 WP_135226753.1 hypothetical protein -
  QNH40_RS05305 (QNH40_05305) - 1058629..1060068 (-) 1440 WP_254001144.1 PLP-dependent aminotransferase family protein -
  QNH40_RS05310 (QNH40_05310) - 1060212..1061381 (+) 1170 WP_135226755.1 MFS transporter -
  QNH40_RS05315 (QNH40_05315) - 1061444..1061722 (+) 279 WP_135226756.1 barstar family protein -
  QNH40_RS05320 (QNH40_05320) ceuB 1061881..1062831 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  QNH40_RS05325 (QNH40_05325) - 1062824..1063774 (+) 951 WP_017366965.1 iron chelate uptake ABC transporter family permease subunit -
  QNH40_RS05330 (QNH40_05330) - 1063765..1064523 (+) 759 WP_056705126.1 ATP-binding cassette domain-containing protein -
  QNH40_RS05335 (QNH40_05335) - 1064546..1065490 (+) 945 WP_202734581.1 siderophore ABC transporter substrate-binding protein -
  QNH40_RS05340 (QNH40_05340) - 1065628..1066584 (+) 957 WP_017360226.1 LCP family protein -
  QNH40_RS05345 (QNH40_05345) - 1066619..1067053 (-) 435 WP_035700181.1 hypothetical protein -
  QNH40_RS05350 (QNH40_05350) - 1067139..1067501 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=835047 QNH40_RS05320 WP_017366964.1 1061881..1062831(+) (ceuB) [Bacillus altitudinis strain CES-OCA-19]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=835047 QNH40_RS05320 WP_017366964.1 1061881..1062831(+) (ceuB) [Bacillus altitudinis strain CES-OCA-19]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGACGTTATGAACTACTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATTATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494