Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH33_RS24890 Genome accession   NZ_CP126085
Coordinates   5118551..5119501 (-) Length   316 a.a.
NCBI ID   WP_048688135.1    Uniprot ID   A0A9X9EQY9
Organism   Peribacillus frigoritolerans strain CF20     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5113551..5124501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH33_RS24875 (QNH33_24875) - 5115701..5116648 (-) 948 WP_283906287.1 siderophore ABC transporter substrate-binding protein -
  QNH33_RS24880 (QNH33_24880) - 5116859..5117617 (-) 759 WP_034310071.1 ABC transporter ATP-binding protein -
  QNH33_RS24885 (QNH33_24885) - 5117611..5118558 (-) 948 WP_053536780.1 iron chelate uptake ABC transporter family permease subunit -
  QNH33_RS24890 (QNH33_24890) ceuB 5118551..5119501 (-) 951 WP_048688135.1 ABC transporter permease Machinery gene
  QNH33_RS24895 (QNH33_24895) - 5119767..5120108 (+) 342 WP_283906288.1 DUF1450 domain-containing protein -
  QNH33_RS24900 (QNH33_24900) - 5120956..5121219 (-) 264 WP_264895916.1 hypothetical protein -
  QNH33_RS24905 (QNH33_24905) - 5122600..5123289 (+) 690 WP_283906289.1 WxL domain-containing protein -
  QNH33_RS24910 (QNH33_24910) - 5123318..5124013 (+) 696 WP_264895918.1 WxL domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34907.25 Da        Isoelectric Point: 9.6490

>NTDB_id=835020 QNH33_RS24890 WP_048688135.1 5118551..5119501(-) (ceuB) [Peribacillus frigoritolerans strain CF20]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLNLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYLSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKLIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=835020 QNH33_RS24890 WP_048688135.1 5118551..5119501(-) (ceuB) [Peribacillus frigoritolerans strain CF20]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTCTATCATTTACGTCATTATTCATTGGTGTAAAAGATATTACCCC
CCTGGATTTATTGAATCTAAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTCCCCAGAATGGTGACCATAGTCA
TTGCCGGTATTGTGATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTATCCCCGACGACTGCC
GGTACCATGGACTCTGCAAGGCTGGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATCT
TCATTCCATTGGTTGGTTTGATGTTTGGTAATATCGTAGGATCGATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACATGGATGAATGGTGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATCTAAGTATCCC
GCTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGAGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGCTTATAGTCAATTTTGGATTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCAAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTGCTAGGGGCAGTCTTCCTATTGATCTGCGATATTCTGGGCAGGATCCTCATATATCCGTTTGAAATCCCGATCG
GACTCGTGGTTGGTGTGATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.316

100

0.503