Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QNH33_RS03750 Genome accession   NZ_CP126085
Coordinates   796971..797768 (+) Length   265 a.a.
NCBI ID   WP_283906603.1    Uniprot ID   -
Organism   Peribacillus frigoritolerans strain CF20     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 791971..802768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH33_RS03725 (QNH33_03725) - 792243..793394 (+) 1152 WP_134784209.1 thiolase family protein -
  QNH33_RS03730 (QNH33_03730) - 793522..795102 (+) 1581 WP_283906602.1 fatty acid--CoA ligase -
  QNH33_RS03735 (QNH33_03735) - 795458..795640 (-) 183 WP_034306455.1 YfhD family protein -
  QNH33_RS03740 (QNH33_03740) - 795749..795871 (-) 123 WP_081088510.1 YfhE family protein -
  QNH33_RS03745 (QNH33_03745) - 795924..796844 (-) 921 WP_283907217.1 TIGR01777 family oxidoreductase -
  QNH33_RS03750 (QNH33_03750) recX 796971..797768 (+) 798 WP_283906603.1 recombination regulator RecX Regulator
  QNH33_RS03755 (QNH33_03755) - 797845..798156 (+) 312 WP_034305394.1 YfhH family protein -
  QNH33_RS03760 (QNH33_03760) - 798198..798353 (-) 156 WP_034305387.1 small, acid-soluble spore protein K -
  QNH33_RS03765 (QNH33_03765) - 798467..798733 (+) 267 WP_034305384.1 YfhJ family protein -
  QNH33_RS03770 (QNH33_03770) - 798783..799760 (-) 978 WP_048685454.1 metal-dependent hydrolase -
  QNH33_RS03775 (QNH33_03775) mutY 799969..801087 (+) 1119 WP_264896353.1 A/G-specific adenine glycosylase -
  QNH33_RS03780 (QNH33_03780) - 801301..801525 (-) 225 WP_034305377.1 hypothetical protein -
  QNH33_RS03785 (QNH33_03785) fabL 801594..802343 (+) 750 WP_048685448.1 enoyl-[acyl-carrier-protein] reductase FabL -
  QNH33_RS03790 (QNH33_03790) - 802425..802703 (+) 279 WP_048685445.1 gamma-type small acid-soluble spore protein -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 31564.11 Da        Isoelectric Point: 7.1873

>NTDB_id=834984 QNH33_RS03750 WP_283906603.1 796971..797768(+) (recX) [Peribacillus frigoritolerans strain CF20]
MPNITKITTQKKRKDRYNIFVDEKYAFSVDEEVLLKFQLKKGMELDDLLLAEIQFHDEIQKAFTDALNYLSYRMRSESEI
RLYLKKKETEEPIIKEAIHKLYSFNYLDDLEFSKAYVRTHVNGGNKGPTTLKLELKEKGVQDKLIVEALKEYPYDIQIEH
ARNLAGKAVKKEKNISERALRLKVEQTLLRKGFPRDVIHEALEDVTVEKDEDEQWDSLCHHAEKMQRRYKNHEGFEYEQK
MKQALYRKGFPIELIERYLSNPDRD

Nucleotide


Download         Length: 798 bp        

>NTDB_id=834984 QNH33_RS03750 WP_283906603.1 796971..797768(+) (recX) [Peribacillus frigoritolerans strain CF20]
ATGCCAAACATAACAAAAATAACAACCCAAAAGAAACGTAAAGATCGTTATAACATCTTCGTCGACGAAAAATATGCCTT
CAGTGTAGACGAAGAAGTGCTATTGAAATTTCAGTTGAAAAAGGGTATGGAACTTGATGACCTGCTTTTGGCCGAAATAC
AATTCCATGATGAAATCCAAAAAGCATTTACCGATGCACTTAATTATTTATCATACCGGATGCGCTCGGAATCGGAAATT
CGCCTTTATTTAAAAAAGAAGGAAACGGAAGAGCCGATCATTAAGGAAGCGATACATAAACTATACAGTTTTAACTATTT
AGACGACCTTGAATTTTCCAAGGCTTACGTACGGACCCATGTGAATGGTGGGAATAAAGGGCCCACTACCCTTAAGCTTG
AGCTTAAGGAAAAAGGGGTGCAAGATAAGTTGATTGTCGAGGCATTGAAGGAATACCCTTATGATATTCAAATTGAACAT
GCAAGGAATCTGGCTGGAAAAGCGGTCAAAAAGGAAAAAAACATTTCCGAACGAGCTTTAAGACTGAAGGTTGAACAAAC
CTTGTTACGGAAAGGTTTCCCTAGAGATGTCATCCATGAAGCACTTGAAGATGTGACGGTTGAAAAGGATGAGGATGAAC
AATGGGATTCCCTTTGCCACCATGCCGAGAAAATGCAACGCCGATATAAAAACCATGAAGGCTTCGAATATGAACAAAAA
ATGAAGCAGGCATTATACCGAAAAGGTTTTCCAATAGAATTGATTGAGCGTTATCTTTCCAATCCTGATAGGGATTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

49.421

97.736

0.483