Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   R8570_RS02595 Genome accession   NZ_AP026932
Coordinates   518423..518689 (+) Length   88 a.a.
NCBI ID   WP_001811621.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900701549     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 513423..523689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8570_RS02575 (PC1528_05150) - 513634..514143 (+) 510 WP_000619941.1 N-acetyltransferase -
  R8570_RS02580 (PC1528_05160) pheT 514220..516625 (+) 2406 WP_050263761.1 phenylalanine--tRNA ligase subunit beta -
  R8570_RS02585 (PC1528_05170) - 516693..517694 (-) 1002 WP_050263759.1 endonuclease/exonuclease/phosphatase family protein -
  R8570_RS02590 (PC1528_05180) - 517850..518338 (+) 489 Protein_509 transposase -
  R8570_RS02595 (PC1528_05190) HI0659 518423..518689 (+) 267 WP_001811621.1 helix-turn-helix domain-containing protein Machinery gene
  R8570_RS02600 (PC1528_05200) metE 518949..521198 (+) 2250 WP_000108270.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  R8570_RS02605 (PC1528_05210) metF 521262..522128 (+) 867 WP_000089968.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9560.13 Da        Isoelectric Point: 4.8274

>NTDB_id=83496 R8570_RS02595 WP_001811621.1 518423..518689(+) (HI0659) [Streptococcus pneumoniae strain PZ900701549]
MEGCLSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEEVSGVSQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=83496 R8570_RS02595 WP_001811621.1 518423..518689(+) (HI0659) [Streptococcus pneumoniae strain PZ900701549]
TTGGAAGGATGTCTATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAAGTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(28-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534

Multiple sequence alignment