Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   QNK02_RS01995 Genome accession   NZ_CP126083
Coordinates   384975..385115 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain C1_9     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 379975..390115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK02_RS01990 (QNK02_01990) srfAB 381839..384931 (+) 3093 Protein_348 surfactin non-ribosomal peptide synthetase SrfAB -
  QNK02_RS01995 (QNK02_01995) comS 384975..385115 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=834878 QNK02_RS01995 WP_010886404.1 384975..385115(+) (comS) [Bacillus subtilis strain C1_9]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=834878 QNK02_RS01995 WP_010886404.1 384975..385115(+) (comS) [Bacillus subtilis strain C1_9]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1