Detailed information NTG0834865

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QNH30_RS19125
• Genome accession: NZ_CP126082
• Coordinates: 3711844..3712989 (+)
• Length: 381 a.a.
• NCBI ID: WP_021480843.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain C1_13
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3706844..3717989

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH30_RS19105 (QNH30_19105)	albF	3706860..3708140 (+)	1281	WP_041850411.1	pitrilysin family protein	-
QNH30_RS19110 (QNH30_19110)	albG	3708137..3708838 (+)	702	WP_041850410.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
QNH30_RS19115 (QNH30_19115)	ywhL	3708844..3710220 (-)	1377	WP_041850409.1	YncE family protein	-
QNH30_RS19120 (QNH30_19120)	ywhK	3710259..3711614 (-)	1356	WP_041850408.1	YncE family protein	-
QNH30_RS21080	-	3711611..3711841 (-)	231	Protein_3705	hypothetical protein	-
QNH30_RS19125 (QNH30_19125)	rapF	3711844..3712989 (+)	1146	WP_021480843.1	response regulator aspartate phosphatase RapF	Regulator
QNH30_RS19130 (QNH30_19130)	phrF	3712973..3713092 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
QNH30_RS19135 (QNH30_19135)	ywhH	3713190..3713663 (+)	474	Protein_3708	YbaK/EbsC family protein	-
QNH30_RS19140 (QNH30_19140)	speB	3713694..3714566 (-)	873	WP_003227545.1	agmatinase	-
QNH30_RS19145 (QNH30_19145)	speE	3714627..3715457 (-)	831	WP_003227543.1	spermidine synthase	-
QNH30_RS19150 (QNH30_19150)	pbpG	3715659..3717734 (+)	2076	WP_041850407.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45603.10 Da
• Isoelectric Point: 5.1493

>NTDB_id=834865 QNH30_RS19125 WP_021480843.1 3711844..3712989(+) (rapF) [Bacillus subtilis strain C1_13]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=834865 QNH30_RS19125 WP_021480843.1 3711844..3712989(+) (rapF) [Bacillus subtilis strain C1_13]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572