Detailed information
Bioinformatically predicted
Overview
| Name | kre | Type | Regulator |
| Locus tag | QNH35_RS07330 | Genome accession | NZ_CP126081 |
| Coordinates | 1454361..1454822 (-) | Length | 153 a.a. |
| NCBI ID | WP_044139814.1 | Uniprot ID | A0AB34QXM2 |
| Organism | Bacillus pumilus strain B2_10 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1454988..1491125 | 1454361..1454822 | flank | 166 |
Gene organization within MGE regions
Location: 1454361..1491125
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QNH35_RS07330 (QNH35_07330) | kre | 1454361..1454822 (-) | 462 | WP_044139814.1 | YkyB family protein | Regulator |
| QNH35_RS07335 (QNH35_07335) | - | 1454988..1456145 (-) | 1158 | WP_047947392.1 | tyrosine-type recombinase/integrase | - |
| QNH35_RS07340 (QNH35_07340) | - | 1456190..1456666 (-) | 477 | WP_283924430.1 | ImmA/IrrE family metallo-endopeptidase | - |
| QNH35_RS07345 (QNH35_07345) | - | 1456679..1457038 (-) | 360 | WP_061418827.1 | helix-turn-helix transcriptional regulator | - |
| QNH35_RS07350 (QNH35_07350) | - | 1457154..1457393 (+) | 240 | WP_283924431.1 | helix-turn-helix transcriptional regulator | - |
| QNH35_RS07355 (QNH35_07355) | - | 1457474..1457746 (+) | 273 | WP_283924432.1 | hypothetical protein | - |
| QNH35_RS07360 (QNH35_07360) | - | 1457896..1458546 (+) | 651 | WP_283924433.1 | Rha family transcriptional regulator | - |
| QNH35_RS07365 (QNH35_07365) | - | 1458738..1459193 (+) | 456 | WP_283924434.1 | hypothetical protein | - |
| QNH35_RS07370 (QNH35_07370) | - | 1459381..1459650 (-) | 270 | WP_283924435.1 | hypothetical protein | - |
| QNH35_RS07375 (QNH35_07375) | - | 1459791..1460552 (+) | 762 | WP_283924436.1 | hypothetical protein | - |
| QNH35_RS07380 (QNH35_07380) | - | 1460717..1461118 (+) | 402 | WP_075621652.1 | hypothetical protein | - |
| QNH35_RS07385 (QNH35_07385) | - | 1461129..1461899 (+) | 771 | WP_047947400.1 | hypothetical protein | - |
| QNH35_RS07390 (QNH35_07390) | - | 1461892..1462251 (+) | 360 | WP_250026781.1 | replicative helicase loader/inhibitor | - |
| QNH35_RS07395 (QNH35_07395) | dnaB | 1462248..1463576 (+) | 1329 | WP_061418855.1 | replicative DNA helicase | - |
| QNH35_RS07400 (QNH35_07400) | - | 1463835..1464209 (-) | 375 | WP_185106924.1 | hypothetical protein | - |
| QNH35_RS07405 (QNH35_07405) | - | 1464286..1464477 (+) | 192 | WP_185106922.1 | XtrA/YqaO family protein | - |
| QNH35_RS07410 (QNH35_07410) | - | 1464749..1465183 (+) | 435 | WP_185106920.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| QNH35_RS07415 (QNH35_07415) | - | 1465264..1465911 (+) | 648 | WP_283924437.1 | hypothetical protein | - |
| QNH35_RS07420 (QNH35_07420) | - | 1466132..1466914 (+) | 783 | WP_276736209.1 | hypothetical protein | - |
| QNH35_RS07425 (QNH35_07425) | - | 1467574..1467711 (+) | 138 | WP_283924438.1 | hypothetical protein | - |
| QNH35_RS07430 (QNH35_07430) | - | 1467774..1467995 (+) | 222 | WP_283924439.1 | hypothetical protein | - |
| QNH35_RS07435 (QNH35_07435) | - | 1467974..1468462 (+) | 489 | WP_106032434.1 | phage terminase small subunit P27 family | - |
| QNH35_RS07440 (QNH35_07440) | - | 1468449..1470176 (+) | 1728 | WP_283924440.1 | terminase TerL endonuclease subunit | - |
| QNH35_RS07445 (QNH35_07445) | - | 1470191..1470391 (+) | 201 | WP_061418892.1 | hypothetical protein | - |
| QNH35_RS07450 (QNH35_07450) | - | 1470398..1471633 (+) | 1236 | WP_283924441.1 | phage portal protein | - |
| QNH35_RS07455 (QNH35_07455) | - | 1471611..1472201 (+) | 591 | WP_185107940.1 | HK97 family phage prohead protease | - |
| QNH35_RS07460 (QNH35_07460) | - | 1472256..1473437 (+) | 1182 | WP_283924442.1 | phage major capsid protein | - |
| QNH35_RS07465 (QNH35_07465) | - | 1473450..1473752 (+) | 303 | WP_283924443.1 | head-tail connector protein | - |
| QNH35_RS07470 (QNH35_07470) | - | 1473734..1474066 (+) | 333 | WP_113387281.1 | head-tail adaptor protein | - |
| QNH35_RS07475 (QNH35_07475) | - | 1474066..1474449 (+) | 384 | WP_185106900.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| QNH35_RS07480 (QNH35_07480) | - | 1474446..1474838 (+) | 393 | WP_283924444.1 | hypothetical protein | - |
| QNH35_RS07485 (QNH35_07485) | - | 1474853..1475461 (+) | 609 | WP_185106897.1 | major tail protein | - |
| QNH35_RS07490 (QNH35_07490) | - | 1475536..1475859 (+) | 324 | WP_185106895.1 | hypothetical protein | - |
| QNH35_RS07495 (QNH35_07495) | - | 1476087..1479749 (+) | 3663 | WP_283924445.1 | phage tail tape measure protein | - |
| QNH35_RS07500 (QNH35_07500) | - | 1479746..1480573 (+) | 828 | WP_283924446.1 | phage tail domain-containing protein | - |
| QNH35_RS07505 (QNH35_07505) | - | 1480582..1482483 (+) | 1902 | WP_283924447.1 | phage tail protein | - |
| QNH35_RS07510 (QNH35_07510) | - | 1482543..1484396 (+) | 1854 | WP_283924448.1 | right-handed parallel beta-helix repeat-containing protein | - |
| QNH35_RS07515 (QNH35_07515) | - | 1484408..1486012 (+) | 1605 | WP_283924449.1 | BppU family phage baseplate upper protein | - |
| QNH35_RS07520 (QNH35_07520) | - | 1486028..1486300 (+) | 273 | WP_265208112.1 | hypothetical protein | - |
| QNH35_RS07525 (QNH35_07525) | - | 1486297..1486443 (+) | 147 | WP_106038152.1 | XkdX family protein | - |
| QNH35_RS07530 (QNH35_07530) | - | 1486483..1486695 (+) | 213 | WP_034324986.1 | BhlA/UviB family holin-like peptide | - |
| QNH35_RS07535 (QNH35_07535) | - | 1486719..1486982 (+) | 264 | WP_265208113.1 | phage holin | - |
| QNH35_RS07540 (QNH35_07540) | - | 1487044..1487844 (+) | 801 | WP_283924450.1 | N-acetylmuramoyl-L-alanine amidase | - |
| QNH35_RS07545 (QNH35_07545) | - | 1487932..1488759 (-) | 828 | WP_283924451.1 | HNH endonuclease | - |
| QNH35_RS07550 (QNH35_07550) | - | 1488831..1489688 (-) | 858 | WP_283924452.1 | SMI1/KNR4 family protein | - |
| QNH35_RS07555 (QNH35_07555) | - | 1489871..1491004 (+) | 1134 | WP_283924453.1 | aspartate phosphatase | - |
| QNH35_RS07560 (QNH35_07560) | - | 1490994..1491125 (+) | 132 | WP_265208118.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 153 a.a. Molecular weight: 17683.29 Da Isoelectric Point: 10.2294
>NTDB_id=834752 QNH35_RS07330 WP_044139814.1 1454361..1454822(-) (kre) [Bacillus pumilus strain B2_10]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGKKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGKKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF
Nucleotide
Download Length: 462 bp
>NTDB_id=834752 QNH35_RS07330 WP_044139814.1 1454361..1454822(-) (kre) [Bacillus pumilus strain B2_10]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGTCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAAAAAAGTGGGCCTACATTTCTCTAACAATCCCAAATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACCAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATCCTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACGAAACCCGTCTTCAAACGACTAGGGGAAAGTTATTTTTAA
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGTCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAAAAAAGTGGGCCTACATTTCTCTAACAATCCCAAATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACCAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATCCTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACGAAACCCGTCTTCAAACGACTAGGGGAAAGTTATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| kre | Bacillus subtilis subsp. subtilis str. 168 |
76.623 |
100 |
0.771 |