Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | QNH35_RS05185 | Genome accession | NZ_CP126081 |
| Coordinates | 1068241..1069191 (+) | Length | 316 a.a. |
| NCBI ID | WP_065098909.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain B2_10 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1044212..1104230 | 1068241..1069191 | within | 0 |
Gene organization within MGE regions
Location: 1044212..1104230
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QNH35_RS05080 (QNH35_05080) | - | 1044346..1046655 (+) | 2310 | WP_283924274.1 | YhgE/Pip domain-containing protein | - |
| QNH35_RS05085 (QNH35_05085) | - | 1046799..1047848 (+) | 1050 | WP_283924275.1 | M42 family metallopeptidase | - |
| QNH35_RS05090 (QNH35_05090) | - | 1048087..1049376 (-) | 1290 | WP_044140699.1 | cation:dicarboxylase symporter family transporter | - |
| QNH35_RS05095 (QNH35_05095) | yhfH | 1049716..1049853 (-) | 138 | WP_283924276.1 | protein YhfH | - |
| QNH35_RS05100 (QNH35_05100) | - | 1050010..1050753 (+) | 744 | WP_065098967.1 | MBL fold metallo-hydrolase | - |
| QNH35_RS05105 (QNH35_05105) | - | 1050756..1051745 (+) | 990 | WP_185107601.1 | lipoate--protein ligase | - |
| QNH35_RS05110 (QNH35_05110) | - | 1051917..1053470 (+) | 1554 | WP_106067174.1 | fatty acid--CoA ligase family protein | - |
| QNH35_RS05115 (QNH35_05115) | - | 1053558..1053965 (-) | 408 | WP_106067175.1 | sporulation protein | - |
| QNH35_RS05120 (QNH35_05120) | - | 1054143..1055426 (+) | 1284 | WP_283924277.1 | M48 family metallopeptidase | - |
| QNH35_RS05125 (QNH35_05125) | - | 1055463..1056608 (-) | 1146 | WP_283924278.1 | S8 family peptidase | - |
| QNH35_RS05130 (QNH35_05130) | - | 1057170..1057754 (-) | 585 | WP_113768382.1 | histidine phosphatase family protein | - |
| QNH35_RS05135 (QNH35_05135) | - | 1057816..1059111 (-) | 1296 | WP_065098915.1 | globin-coupled sensor protein | - |
| QNH35_RS05140 (QNH35_05140) | - | 1059203..1060735 (-) | 1533 | WP_268452869.1 | FAD-dependent oxidoreductase | - |
| QNH35_RS05145 (QNH35_05145) | - | 1060881..1061741 (+) | 861 | WP_113768384.1 | SDR family oxidoreductase | - |
| QNH35_RS05150 (QNH35_05150) | - | 1061805..1062035 (-) | 231 | WP_003210924.1 | IDEAL domain-containing protein | - |
| QNH35_RS05155 (QNH35_05155) | comK | 1062325..1062903 (+) | 579 | WP_003212419.1 | competence protein ComK | Regulator |
| QNH35_RS05160 (QNH35_05160) | - | 1063053..1064159 (+) | 1107 | WP_106067178.1 | D-TA family PLP-dependent enzyme | - |
| QNH35_RS05165 (QNH35_05165) | - | 1064475..1064957 (+) | 483 | WP_106067179.1 | hypothetical protein | - |
| QNH35_RS05170 (QNH35_05170) | - | 1064993..1066420 (-) | 1428 | WP_283924279.1 | PLP-dependent aminotransferase family protein | - |
| QNH35_RS05175 (QNH35_05175) | - | 1066565..1067734 (+) | 1170 | WP_065098910.1 | MFS transporter | - |
| QNH35_RS05180 (QNH35_05180) | - | 1067799..1068074 (+) | 276 | WP_044140712.1 | barstar family protein | - |
| QNH35_RS05185 (QNH35_05185) | ceuB | 1068241..1069191 (+) | 951 | WP_065098909.1 | ABC transporter permease | Machinery gene |
| QNH35_RS05190 (QNH35_05190) | - | 1069184..1070134 (+) | 951 | WP_065098908.1 | iron chelate uptake ABC transporter family permease subunit | - |
| QNH35_RS05195 (QNH35_05195) | - | 1070125..1070883 (+) | 759 | WP_044140715.1 | ATP-binding cassette domain-containing protein | - |
| QNH35_RS05200 (QNH35_05200) | - | 1070906..1071850 (+) | 945 | WP_044140716.1 | siderophore ABC transporter substrate-binding protein | - |
| QNH35_RS05205 (QNH35_05205) | - | 1071993..1072949 (+) | 957 | WP_065098905.1 | LCP family protein | - |
| QNH35_RS05210 (QNH35_05210) | - | 1073018..1073380 (-) | 363 | WP_003210969.1 | hypothetical protein | - |
| QNH35_RS05215 (QNH35_05215) | - | 1073531..1074148 (+) | 618 | WP_080772985.1 | TVP38/TMEM64 family protein | - |
| QNH35_RS05220 (QNH35_05220) | lepB | 1074148..1074660 (+) | 513 | WP_041815362.1 | signal peptidase I | - |
| QNH35_RS05225 (QNH35_05225) | - | 1074697..1075842 (-) | 1146 | WP_044140720.1 | AbrB family transcriptional regulator | - |
| QNH35_RS05230 (QNH35_05230) | - | 1076258..1077388 (-) | 1131 | WP_283924280.1 | site-specific integrase | - |
| QNH35_RS05235 (QNH35_05235) | - | 1077404..1077916 (-) | 513 | WP_283924281.1 | ImmA/IrrE family metallo-endopeptidase | - |
| QNH35_RS05240 (QNH35_05240) | - | 1077916..1078287 (-) | 372 | WP_073979209.1 | helix-turn-helix transcriptional regulator | - |
| QNH35_RS05245 (QNH35_05245) | - | 1078452..1078643 (+) | 192 | WP_341015528.1 | ICEBs1 excisionase | - |
| QNH35_RS05250 (QNH35_05250) | - | 1078643..1078885 (+) | 243 | WP_283924283.1 | hypothetical protein | - |
| QNH35_RS05255 (QNH35_05255) | - | 1078942..1079226 (+) | 285 | WP_065097530.1 | hypothetical protein | - |
| QNH35_RS05260 (QNH35_05260) | - | 1079579..1079962 (+) | 384 | WP_216927574.1 | DUF961 family protein | - |
| QNH35_RS05265 (QNH35_05265) | - | 1079978..1081393 (+) | 1416 | WP_283924284.1 | FtsK/SpoIIIE domain-containing protein | - |
| QNH35_RS05270 (QNH35_05270) | - | 1081403..1082455 (+) | 1053 | WP_283924285.1 | replication initiation factor domain-containing protein | - |
| QNH35_RS05275 (QNH35_05275) | - | 1082714..1082971 (+) | 258 | WP_223251396.1 | DUF3850 domain-containing protein | - |
| QNH35_RS05280 (QNH35_05280) | - | 1082988..1083119 (+) | 132 | WP_283924286.1 | hypothetical protein | - |
| QNH35_RS05285 (QNH35_05285) | - | 1083476..1083790 (+) | 315 | WP_283924287.1 | hypothetical protein | - |
| QNH35_RS05290 (QNH35_05290) | - | 1083833..1084510 (+) | 678 | WP_283924288.1 | hypothetical protein | - |
| QNH35_RS05295 (QNH35_05295) | - | 1084566..1087112 (+) | 2547 | WP_283924289.1 | thioester domain-containing protein | - |
| QNH35_RS05300 (QNH35_05300) | - | 1087372..1087641 (+) | 270 | WP_283924290.1 | hypothetical protein | - |
| QNH35_RS05305 (QNH35_05305) | - | 1087721..1087999 (+) | 279 | WP_283924291.1 | hypothetical protein | - |
| QNH35_RS05310 (QNH35_05310) | - | 1088024..1088296 (+) | 273 | WP_283924292.1 | hypothetical protein | - |
| QNH35_RS05315 (QNH35_05315) | - | 1088332..1088589 (+) | 258 | WP_283924293.1 | hypothetical protein | - |
| QNH35_RS05320 (QNH35_05320) | - | 1088641..1088910 (+) | 270 | WP_283924294.1 | hypothetical protein | - |
| QNH35_RS05325 (QNH35_05325) | - | 1088932..1089213 (+) | 282 | WP_283924295.1 | hypothetical protein | - |
| QNH35_RS05330 (QNH35_05330) | - | 1089244..1089636 (+) | 393 | WP_283924296.1 | hypothetical protein | - |
| QNH35_RS05335 (QNH35_05335) | - | 1089633..1090862 (+) | 1230 | WP_283924297.1 | CpaF/VirB11 family protein | - |
| QNH35_RS05340 (QNH35_05340) | - | 1090849..1091661 (+) | 813 | WP_283924298.1 | hypothetical protein | - |
| QNH35_RS05345 (QNH35_05345) | - | 1091666..1092427 (+) | 762 | WP_268496428.1 | hypothetical protein | - |
| QNH35_RS05350 (QNH35_05350) | - | 1092434..1092793 (+) | 360 | WP_283924299.1 | hypothetical protein | - |
| QNH35_RS05355 (QNH35_05355) | - | 1092807..1092953 (+) | 147 | WP_283924300.1 | hypothetical protein | - |
| QNH35_RS05360 (QNH35_05360) | - | 1092975..1093133 (+) | 159 | WP_268496423.1 | hypothetical protein | - |
| QNH35_RS05365 (QNH35_05365) | - | 1093622..1094617 (+) | 996 | WP_283924301.1 | conjugal transfer protein | - |
| QNH35_RS05370 (QNH35_05370) | - | 1094629..1094883 (+) | 255 | WP_283924302.1 | hypothetical protein | - |
| QNH35_RS05375 (QNH35_05375) | - | 1094895..1095392 (+) | 498 | WP_283924303.1 | conjugal transfer protein | - |
| QNH35_RS05380 (QNH35_05380) | - | 1095346..1097802 (+) | 2457 | WP_347343031.1 | ATP-binding protein | - |
| QNH35_RS05385 (QNH35_05385) | - | 1098602..1100980 (+) | 2379 | WP_283924305.1 | hypothetical protein | - |
| QNH35_RS05390 (QNH35_05390) | - | 1100977..1101954 (+) | 978 | WP_283924306.1 | lysozyme family protein | - |
| QNH35_RS05395 (QNH35_05395) | - | 1101964..1102464 (+) | 501 | WP_283924307.1 | hypothetical protein | - |
| QNH35_RS05400 (QNH35_05400) | - | 1102546..1103694 (+) | 1149 | WP_283924308.1 | tetratricopeptide repeat protein | - |
| QNH35_RS05405 (QNH35_05405) | - | 1103657..1103779 (+) | 123 | WP_260856974.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 316 a.a. Molecular weight: 34876.21 Da Isoelectric Point: 9.6341
>NTDB_id=834741 QNH35_RS05185 WP_065098909.1 1068241..1069191(+) (ceuB) [Bacillus pumilus strain B2_10]
MKLYQLSLLFVCLACVSLFVGVQDLSILQLFHLTDEQVHTLVSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHASPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAINLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSGIFLYMLLRRKHYA
MKLYQLSLLFVCLACVSLFVGVQDLSILQLFHLTDEQVHTLVSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHASPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAINLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSGIFLYMLLRRKHYA
Nucleotide
Download Length: 951 bp
>NTDB_id=834741 QNH35_RS05185 WP_065098909.1 1068241..1069191(+) (ceuB) [Bacillus pumilus strain B2_10]
ATGAAGTTGTATCAATTAAGTTTATTATTTGTATGTTTGGCATGTGTATCACTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCATACGTTAGTTTCAAGTCGCATCCCGCGTCTCATGAGTATTGTGC
TTGCTGGCATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAGCCCGCTCATGAAAATGGG
AATCGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATCT
ATGTACCTTTAGTCGGTTTAATGTTTGGCGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATCTGATT
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTTCTCTATGTGAGTGTTCC
ACTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCGGGAATGGGTGAGAGCTTTGCCATCAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGTTTGGTGATTGTTTCGATGATTACATCTGTCACCATATTAACTGTCGGGATG
CTACCATTCCTAGGCTTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAGAGCCTTCCGCATAC
AGCCTTACTAGGAGCCATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTAATCATTTATCCATATGAAATTTCAGTTG
GGCTCATGGTAGGCATCATCGGAAGTGGGATCTTCCTGTACATGTTATTAAGGAGGAAACACTATGCATAA
ATGAAGTTGTATCAATTAAGTTTATTATTTGTATGTTTGGCATGTGTATCACTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCATACGTTAGTTTCAAGTCGCATCCCGCGTCTCATGAGTATTGTGC
TTGCTGGCATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAGCCCGCTCATGAAAATGGG
AATCGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATCT
ATGTACCTTTAGTCGGTTTAATGTTTGGCGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATCTGATT
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTTCTCTATGTGAGTGTTCC
ACTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCGGGAATGGGTGAGAGCTTTGCCATCAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGTTTGGTGATTGTTTCGATGATTACATCTGTCACCATATTAACTGTCGGGATG
CTACCATTCCTAGGCTTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAGAGCCTTCCGCATAC
AGCCTTACTAGGAGCCATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTAATCATTTATCCATATGAAATTTCAGTTG
GGCTCATGGTAGGCATCATCGGAAGTGGGATCTTCCTGTACATGTTATTAAGGAGGAAACACTATGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
51.827 |
95.253 |
0.494 |