Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JLC71_RS14735 Genome accession   NZ_AP024094
Coordinates   3056596..3056979 (+) Length   127 a.a.
NCBI ID   WP_200916267.1    Uniprot ID   A0A7I8EG72
Organism   Jeongeupia sp. HS-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3051596..3061979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JLC71_RS14715 (JHS3_28660) ccsB 3051614..3052732 (-) 1119 WP_200916258.1 c-type cytochrome biogenesis protein CcsB -
  JLC71_RS14720 (JHS3_28670) - 3052729..3054792 (-) 2064 WP_200916260.1 cytochrome c biogenesis protein ResB -
  JLC71_RS14725 (JHS3_28680) - 3054863..3055480 (-) 618 WP_200916262.1 cytochrome c -
  JLC71_RS14730 (JHS3_28690) yihA 3055581..3056231 (+) 651 WP_200916264.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
  JLC71_RS14735 (JHS3_28700) pilG 3056596..3056979 (+) 384 WP_200916267.1 PleD family two-component system response regulator Regulator
  JLC71_RS14740 (JHS3_28710) - 3057031..3057387 (+) 357 WP_374757634.1 response regulator transcription factor -
  JLC71_RS14745 (JHS3_28720) - 3057400..3057903 (+) 504 WP_200916271.1 chemotaxis protein CheW -
  JLC71_RS14750 (JHS3_28730) - 3057940..3060108 (+) 2169 WP_200916273.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14165.34 Da        Isoelectric Point: 6.4607

>NTDB_id=83470 JLC71_RS14735 WP_200916267.1 3056596..3056979(+) (pilG) [Jeongeupia sp. HS-3]
MSELTGVRVMVIDDSNTIRRSAEIFLGQAGCEVILAEDGFDALAKISDHQPQLIFVDVMMPRLDGYQTCSLIKKNPRYKT
TPVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLAAVGEHVQQR

Nucleotide


Download         Length: 384 bp        

>NTDB_id=83470 JLC71_RS14735 WP_200916267.1 3056596..3056979(+) (pilG) [Jeongeupia sp. HS-3]
ATGTCGGAACTCACCGGGGTCAGGGTGATGGTGATTGATGACAGCAACACCATCCGTCGCAGCGCCGAAATTTTCCTGGG
GCAAGCCGGTTGCGAGGTCATCCTTGCCGAAGACGGCTTCGATGCCTTGGCCAAGATCAGTGATCATCAGCCGCAGTTGA
TTTTCGTCGACGTGATGATGCCGCGTCTTGATGGCTACCAGACGTGTTCGCTGATCAAGAAAAACCCGCGTTACAAGACC
ACGCCGGTGATCATGCTCTCCAGCAAGGATGGCCTGTTCGACCGCGCCCGCGGCCGCATGGTCGGTTCCGACGAATATCT
CACCAAGCCATTTACCAAGGACAGTCTGCTGGCCGCCGTCGGCGAGCACGTGCAGCAGCGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7I8EG72

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.227

93.701

0.63

Multiple sequence alignment