Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   QNH36_RS07350 Genome accession   NZ_CP126080
Coordinates   1494294..1496111 (+) Length   605 a.a.
NCBI ID   WP_144474569.1    Uniprot ID   A0AA95I5N7
Organism   Mesobacillus sp. AQ2     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1489294..1501111
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH36_RS07335 (QNH36_07335) mecA 1490395..1491066 (+) 672 WP_144474566.1 adaptor protein MecA -
  QNH36_RS07340 (QNH36_07340) cls 1491312..1492823 (+) 1512 WP_144474567.1 cardiolipin synthase -
  QNH36_RS07345 (QNH36_07345) - 1492941..1494143 (+) 1203 WP_283905007.1 competence protein CoiA family protein -
  QNH36_RS07350 (QNH36_07350) pepF 1494294..1496111 (+) 1818 WP_144474569.1 oligoendopeptidase F Regulator
  QNH36_RS07355 (QNH36_07355) - 1496931..1497812 (-) 882 WP_283905008.1 ClpXP adapter SpxH family protein -
  QNH36_RS07360 (QNH36_07360) - 1497809..1498210 (-) 402 WP_283905009.1 globin -
  QNH36_RS07365 (QNH36_07365) - 1498431..1499078 (-) 648 WP_349654841.1 lytic transglycosylase domain-containing protein -
  QNH36_RS07370 (QNH36_07370) - 1499095..1499682 (-) 588 WP_283905010.1 CYTH domain-containing protein -
  QNH36_RS07375 (QNH36_07375) - 1499801..1500181 (+) 381 WP_283905011.1 hypothetical protein -
  QNH36_RS07380 (QNH36_07380) - 1500216..1500854 (+) 639 WP_144474575.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 69906.27 Da        Isoelectric Point: 4.7695

>NTDB_id=834694 QNH36_RS07350 WP_144474569.1 1494294..1496111(+) (pepF) [Mesobacillus sp. AQ2]
MSDETAVKKLPSRDEAATENTWRLEDIFASDDAWEKEFNEVKSLVPSVQEYQGKLGDSADQLYDALQLQDKLLERLGRLY
TYAHMRYDQDTTNSFYQGLDDRIKNLYSQAGSALAYIVPEILAVDEEKIKGFLQEKKELKLYEHALEEINLQRPHVLSAE
EEALLAQAGEVMSSPSNTFGMLNNADLEFPSIKDENGEDVEITHGRYIRFLESEDRRVREDAFKAVYKTYGSFKNTFSST
LSGNIKKDNFNARIRKYDSARHAALAANNIPESVYENLVNTVNDNLHLLHRYVKLRRKVLGLDKLHMYDLYTPLVKNVKM
EIPYGEAKDYVLKGLEPLGQEYNQVLQEGFENRWVDVYENKGKRSGAYSSGAYGTNPYILMNWQDNVNNLFTLAHEFGHS
VHSYYTRKTQPYPYGNYSIFVAEVASTCNEALLNDYMLKTIDDEQKRLYLLNHYLEGFRGTVFRQTMFAEFEHMIHQKAQ
NNEALTADSLTKDYYELNKKYFGEEDIIIDEEIGLEWSRIPHFYYNYYVYQYATGFSAATALSKQILEEGQPAVERYIEF
LKSGSSDYPIEVLKKAGVDMTSSKPIEEALKVFEEKLNEMEALLS

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=834694 QNH36_RS07350 WP_144474569.1 1494294..1496111(+) (pepF) [Mesobacillus sp. AQ2]
ATGTCTGATGAAACTGCAGTAAAAAAATTGCCATCAAGAGATGAGGCTGCCACCGAGAATACGTGGAGACTTGAAGATAT
TTTCGCGAGTGATGATGCCTGGGAAAAAGAATTCAATGAAGTGAAGAGCTTAGTTCCTTCTGTCCAGGAATATCAGGGAA
AACTTGGGGATAGTGCGGATCAGCTTTACGATGCACTGCAATTGCAGGATAAGCTATTAGAGCGCCTTGGCAGATTATAT
ACATATGCACATATGCGCTATGACCAGGATACAACAAATTCTTTTTATCAAGGACTGGATGACCGCATCAAGAATCTGTA
TTCCCAGGCGGGAAGTGCACTGGCTTATATTGTGCCGGAAATCCTGGCTGTCGACGAAGAAAAGATTAAAGGCTTTTTGC
AGGAGAAGAAAGAGCTGAAGCTTTATGAGCATGCTTTGGAGGAAATCAATCTTCAGAGACCGCATGTCCTTTCAGCCGAA
GAGGAAGCGCTGCTTGCACAGGCAGGGGAGGTAATGAGTTCACCGTCAAATACTTTTGGCATGCTGAACAATGCGGATTT
GGAATTCCCTTCGATTAAGGACGAGAACGGTGAAGATGTGGAAATCACCCATGGCCGTTACATCCGTTTCCTTGAAAGTG
AAGATCGCAGGGTACGCGAGGATGCCTTCAAAGCGGTTTACAAAACATATGGCAGCTTCAAAAATACATTTTCAAGCACA
TTGAGCGGCAATATCAAGAAGGATAACTTCAATGCAAGAATCCGTAAATATGATTCTGCGAGGCATGCTGCACTTGCTGC
GAATAATATCCCTGAAAGTGTTTATGAAAACCTTGTGAATACAGTGAATGATAACCTGCACCTGCTTCATAGATACGTAA
AGCTTCGAAGGAAGGTACTGGGCCTCGATAAGCTTCATATGTATGACCTTTACACACCATTGGTGAAGAACGTGAAAATG
GAAATCCCATATGGAGAGGCTAAAGATTATGTCCTAAAAGGCCTAGAGCCACTTGGACAGGAATATAATCAGGTCCTTCA
GGAGGGTTTTGAAAATCGCTGGGTAGATGTGTATGAGAACAAAGGGAAGCGCAGCGGTGCCTATTCTTCGGGTGCATATG
GCACAAATCCATACATCCTGATGAACTGGCAGGATAATGTGAATAATTTATTTACGCTTGCACATGAGTTCGGACATTCG
GTCCACAGCTACTACACTAGGAAAACTCAGCCATATCCATATGGAAACTACTCAATTTTTGTTGCAGAGGTAGCTTCCAC
ATGCAATGAAGCGCTTTTGAATGACTATATGCTGAAAACGATTGATGATGAGCAGAAGCGCTTGTATTTACTGAATCACT
ATCTCGAGGGCTTCAGGGGAACTGTGTTCAGACAGACCATGTTCGCTGAATTTGAACATATGATTCACCAGAAAGCACAG
AATAACGAAGCTTTGACAGCTGATTCTCTCACAAAGGATTATTATGAGCTCAATAAAAAATACTTCGGTGAAGAAGACAT
CATTATTGATGAGGAAATCGGACTGGAGTGGTCTAGGATTCCGCATTTCTATTACAATTACTATGTATACCAGTATGCGA
CAGGCTTCAGTGCAGCGACAGCACTGAGCAAACAGATCCTTGAGGAAGGACAGCCTGCTGTCGAACGATATATTGAATTC
CTGAAATCAGGAAGCTCTGACTATCCAATCGAAGTCCTGAAAAAGGCAGGAGTGGATATGACAAGCTCGAAGCCAATTGA
GGAAGCTTTGAAGGTATTCGAAGAAAAGCTGAACGAAATGGAAGCATTGCTTTCTTAG

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(211-591)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.512

96.86

0.489