Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QNH36_RS07190 Genome accession   NZ_CP126080
Coordinates   1458500..1459450 (+) Length   316 a.a.
NCBI ID   WP_144474541.1    Uniprot ID   -
Organism   Mesobacillus sp. AQ2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1453500..1464450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH36_RS07170 (QNH36_07170) clpB 1453590..1456190 (+) 2601 WP_283905003.1 ATP-dependent chaperone ClpB -
  QNH36_RS07175 (QNH36_07175) - 1456237..1456425 (-) 189 WP_144474539.1 YjzD family protein -
  QNH36_RS07180 (QNH36_07180) - 1456717..1457460 (+) 744 WP_313959695.1 hydrolase -
  QNH36_RS07185 (QNH36_07185) - 1457528..1458355 (+) 828 WP_144474540.1 NAD(P)-dependent oxidoreductase -
  QNH36_RS07190 (QNH36_07190) med 1458500..1459450 (+) 951 WP_144474541.1 BMP family ABC transporter substrate-binding protein Regulator
  QNH36_RS07195 (QNH36_07195) comZ 1459476..1459664 (+) 189 WP_144474542.1 ComZ family protein Regulator
  QNH36_RS07200 (QNH36_07200) - 1459690..1460001 (-) 312 WP_144474543.1 hypothetical protein -
  QNH36_RS07205 (QNH36_07205) - 1460262..1461194 (+) 933 WP_144474544.1 beta-ketoacyl-ACP synthase III -
  QNH36_RS07210 (QNH36_07210) fabF 1461248..1462489 (+) 1242 WP_283905383.1 beta-ketoacyl-ACP synthase II -
  QNH36_RS07215 (QNH36_07215) - 1462837..1463820 (+) 984 WP_283905004.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35247.57 Da        Isoelectric Point: 4.4433

>NTDB_id=834689 QNH36_RS07190 WP_144474541.1 1458500..1459450(+) (med) [Mesobacillus sp. AQ2]
MLKRFGLILLSLLLLGGCGQPIASGKVEKVGLLVPETIDDQVWGTKGYRGLLQIQTRLGVDVFFKEGMDSQEAVEEAVKE
FDRKGVNLIYGHGNEYAAFFNKISEEYPDIHFISFNGDARKKNTTSLNFEGYAMGFFGGMVASHMSETGKVGIIAAYEWQ
PEVEGFYDGAIFENKNMKVNIRYVGHWDDQKKALEVLDEVLDEGADVIYPAGDGYNVPVIEKVKDSGFYVIGYISDQSDF
GESTVLTSTVQHVDDLYELTAEKYNNGNLESGNLSFDFQDGVITLGKFSPDVDSEYRKKLNTYINTYKNTGKLPNQ

Nucleotide


Download         Length: 951 bp        

>NTDB_id=834689 QNH36_RS07190 WP_144474541.1 1458500..1459450(+) (med) [Mesobacillus sp. AQ2]
ATGCTGAAACGTTTCGGGCTGATATTGTTAAGCCTTCTTTTGCTTGGAGGATGCGGACAACCTATTGCATCCGGGAAGGT
AGAGAAAGTCGGCCTGCTGGTGCCTGAAACTATTGATGATCAGGTGTGGGGGACAAAGGGATATCGCGGTCTTCTGCAAA
TCCAGACCCGTCTGGGTGTTGATGTTTTTTTCAAGGAAGGTATGGATTCCCAAGAAGCTGTAGAGGAAGCTGTCAAGGAG
TTCGACCGTAAAGGTGTGAACCTGATCTATGGCCATGGCAATGAGTACGCTGCCTTTTTCAATAAGATATCTGAAGAATA
TCCAGATATCCATTTCATCAGTTTTAATGGAGATGCCCGAAAGAAGAACACGACAAGTCTGAACTTTGAGGGATATGCTA
TGGGATTCTTTGGAGGTATGGTCGCGAGCCATATGTCTGAAACTGGCAAGGTCGGTATCATTGCAGCTTATGAATGGCAG
CCTGAAGTCGAAGGATTTTATGATGGGGCCATTTTTGAAAATAAGAATATGAAGGTCAACATCCGTTATGTTGGCCACTG
GGATGACCAAAAGAAAGCGCTGGAAGTTCTTGACGAAGTTTTGGACGAGGGAGCGGATGTTATTTATCCTGCCGGAGATG
GGTATAATGTTCCCGTTATCGAAAAAGTGAAGGACAGCGGCTTTTATGTGATTGGCTATATTTCTGACCAGTCCGATTTC
GGCGAGTCGACGGTTCTGACGAGTACTGTCCAGCATGTTGACGACTTGTATGAATTAACGGCTGAGAAGTACAATAACGG
CAATCTTGAATCTGGCAATTTATCATTCGACTTTCAAGACGGTGTGATTACCCTTGGCAAATTCAGCCCTGATGTCGATT
CAGAGTACCGCAAAAAGTTAAATACTTATATCAATACTTATAAAAACACTGGCAAATTACCTAATCAATGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.503

99.367

0.532