Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | JLC71_RS13660 | Genome accession | NZ_AP024094 |
| Coordinates | 2848349..2849533 (+) | Length | 394 a.a. |
| NCBI ID | WP_200915997.1 | Uniprot ID | A0A7I8ECI9 |
| Organism | Jeongeupia sp. HS-3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2843349..2854533
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLC71_RS13630 (JHS3_26450) | - | 2843484..2843732 (-) | 249 | WP_200915991.1 | hypothetical protein | - |
| JLC71_RS13635 (JHS3_26460) | cysK | 2843907..2844839 (-) | 933 | WP_200915992.1 | cysteine synthase A | - |
| JLC71_RS13640 (JHS3_26470) | - | 2844937..2846151 (+) | 1215 | WP_200915993.1 | multifunctional CCA addition/repair protein | - |
| JLC71_RS13645 (JHS3_26480) | - | 2846148..2847215 (-) | 1068 | WP_200915994.1 | tetratricopeptide repeat protein | - |
| JLC71_RS13650 (JHS3_26490) | - | 2847371..2847622 (-) | 252 | WP_200915995.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| JLC71_RS13655 (JHS3_26500) | rsmD | 2847724..2848281 (-) | 558 | WP_200915996.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| JLC71_RS13660 (JHS3_26510) | pilA | 2848349..2849533 (+) | 1185 | WP_200915997.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| JLC71_RS13665 (JHS3_26520) | - | 2849549..2850046 (+) | 498 | WP_200915998.1 | GNAT family N-acetyltransferase | - |
| JLC71_RS13670 (JHS3_26530) | ftsE | 2850087..2850740 (+) | 654 | WP_200915999.1 | cell division ATP-binding protein FtsE | - |
| JLC71_RS13675 (JHS3_26540) | ftsX | 2850751..2851647 (+) | 897 | WP_200916000.1 | permease-like cell division protein FtsX | - |
| JLC71_RS13680 (JHS3_26550) | rpoH | 2851822..2852682 (+) | 861 | WP_200916001.1 | RNA polymerase sigma factor RpoH | - |
| JLC71_RS13685 (JHS3_26560) | queC | 2852746..2853429 (-) | 684 | WP_200916002.1 | 7-cyano-7-deazaguanine synthase QueC | - |
Sequence
Protein
Download Length: 394 a.a. Molecular weight: 41576.86 Da Isoelectric Point: 4.8967
>NTDB_id=83467 JLC71_RS13660 WP_200915997.1 2848349..2849533(+) (pilA) [Jeongeupia sp. HS-3]
MFSFFRKKKPAEAAPEQLDAAIEPAAAEPIAPAQASVPQPETPVAPVAPTPSEPEPVAEAAAPVLEIAPVVVPEPVAATA
ATIVVAQPQDKPKLSWTERLKAGLAKTRDKLSKNLAGLFGGGKIDEELYEELETVLLTADMGVNATTHLLDDVRERVSLK
GLKDTLELKGALKDSLNALIGPLEVPLDISGHKPFILMVAGVNGAGKTTSIGKLAKYFQLQGKSVLLAAGDTFRAAAREQ
LVVWGERNGVQVIAQDSGDAAAVAFDAVNAAKARGVDVVIVDTAGRLPTQLHLMEEIRKVKRVVQKADPTGPHEIMLVLD
ANTGQNAVSQVKAFDDALDLTGLVLTKLDGTAKGGVIAAIARERSIPLRFIGVGESIDDLRPFVARDYVDALFD
MFSFFRKKKPAEAAPEQLDAAIEPAAAEPIAPAQASVPQPETPVAPVAPTPSEPEPVAEAAAPVLEIAPVVVPEPVAATA
ATIVVAQPQDKPKLSWTERLKAGLAKTRDKLSKNLAGLFGGGKIDEELYEELETVLLTADMGVNATTHLLDDVRERVSLK
GLKDTLELKGALKDSLNALIGPLEVPLDISGHKPFILMVAGVNGAGKTTSIGKLAKYFQLQGKSVLLAAGDTFRAAAREQ
LVVWGERNGVQVIAQDSGDAAAVAFDAVNAAKARGVDVVIVDTAGRLPTQLHLMEEIRKVKRVVQKADPTGPHEIMLVLD
ANTGQNAVSQVKAFDDALDLTGLVLTKLDGTAKGGVIAAIARERSIPLRFIGVGESIDDLRPFVARDYVDALFD
Nucleotide
Download Length: 1185 bp
>NTDB_id=83467 JLC71_RS13660 WP_200915997.1 2848349..2849533(+) (pilA) [Jeongeupia sp. HS-3]
ATGTTCAGTTTCTTCCGCAAGAAAAAGCCGGCCGAGGCTGCACCCGAGCAGCTCGACGCCGCAATCGAGCCGGCCGCCGC
CGAGCCGATCGCACCCGCGCAGGCCAGCGTGCCGCAGCCCGAAACCCCTGTCGCGCCGGTCGCGCCAACGCCGAGTGAGC
CGGAGCCCGTCGCCGAGGCCGCCGCACCGGTGCTTGAGATCGCACCGGTCGTGGTTCCCGAACCCGTCGCCGCAACCGCT
GCAACCATCGTCGTGGCGCAACCGCAAGACAAACCCAAGCTCTCGTGGACCGAGCGGCTCAAGGCCGGTCTGGCCAAGAC
GCGCGACAAGCTCAGCAAGAACCTTGCCGGCCTGTTCGGCGGCGGCAAGATCGACGAGGAATTGTACGAAGAGCTGGAAA
CGGTGCTGCTGACCGCCGATATGGGCGTCAACGCGACCACCCATCTGCTCGACGACGTGCGCGAGCGCGTCTCGCTCAAG
GGCCTGAAGGATACGCTGGAGCTGAAGGGTGCGTTGAAAGACAGCCTGAACGCGCTGATCGGCCCGCTCGAAGTGCCGCT
CGACATCAGCGGCCACAAGCCCTTCATCCTGATGGTTGCCGGCGTCAACGGCGCGGGCAAGACCACCAGCATCGGCAAGC
TGGCCAAGTATTTTCAGTTGCAAGGCAAGTCGGTGTTGCTCGCCGCTGGTGATACCTTCCGCGCTGCGGCGCGCGAGCAA
CTGGTGGTCTGGGGCGAGCGCAATGGCGTGCAGGTGATCGCGCAGGACAGTGGCGATGCCGCCGCGGTGGCGTTTGACGC
GGTCAACGCTGCGAAGGCACGCGGCGTCGACGTGGTGATCGTCGATACCGCCGGCCGTTTGCCGACGCAGCTGCATCTGA
TGGAAGAAATCCGCAAGGTGAAGCGCGTGGTGCAGAAGGCCGATCCGACCGGCCCGCATGAAATCATGCTGGTGCTCGAC
GCCAACACCGGCCAGAACGCGGTCTCGCAGGTCAAGGCTTTCGACGATGCGCTCGACCTGACCGGTCTGGTGCTGACCAA
GCTCGACGGCACCGCCAAGGGCGGCGTGATCGCGGCGATTGCGCGCGAACGCAGCATTCCGCTGCGCTTTATCGGCGTCG
GCGAAAGCATCGACGATTTGCGCCCGTTTGTGGCGCGTGATTACGTCGACGCATTGTTCGACTGA
ATGTTCAGTTTCTTCCGCAAGAAAAAGCCGGCCGAGGCTGCACCCGAGCAGCTCGACGCCGCAATCGAGCCGGCCGCCGC
CGAGCCGATCGCACCCGCGCAGGCCAGCGTGCCGCAGCCCGAAACCCCTGTCGCGCCGGTCGCGCCAACGCCGAGTGAGC
CGGAGCCCGTCGCCGAGGCCGCCGCACCGGTGCTTGAGATCGCACCGGTCGTGGTTCCCGAACCCGTCGCCGCAACCGCT
GCAACCATCGTCGTGGCGCAACCGCAAGACAAACCCAAGCTCTCGTGGACCGAGCGGCTCAAGGCCGGTCTGGCCAAGAC
GCGCGACAAGCTCAGCAAGAACCTTGCCGGCCTGTTCGGCGGCGGCAAGATCGACGAGGAATTGTACGAAGAGCTGGAAA
CGGTGCTGCTGACCGCCGATATGGGCGTCAACGCGACCACCCATCTGCTCGACGACGTGCGCGAGCGCGTCTCGCTCAAG
GGCCTGAAGGATACGCTGGAGCTGAAGGGTGCGTTGAAAGACAGCCTGAACGCGCTGATCGGCCCGCTCGAAGTGCCGCT
CGACATCAGCGGCCACAAGCCCTTCATCCTGATGGTTGCCGGCGTCAACGGCGCGGGCAAGACCACCAGCATCGGCAAGC
TGGCCAAGTATTTTCAGTTGCAAGGCAAGTCGGTGTTGCTCGCCGCTGGTGATACCTTCCGCGCTGCGGCGCGCGAGCAA
CTGGTGGTCTGGGGCGAGCGCAATGGCGTGCAGGTGATCGCGCAGGACAGTGGCGATGCCGCCGCGGTGGCGTTTGACGC
GGTCAACGCTGCGAAGGCACGCGGCGTCGACGTGGTGATCGTCGATACCGCCGGCCGTTTGCCGACGCAGCTGCATCTGA
TGGAAGAAATCCGCAAGGTGAAGCGCGTGGTGCAGAAGGCCGATCCGACCGGCCCGCATGAAATCATGCTGGTGCTCGAC
GCCAACACCGGCCAGAACGCGGTCTCGCAGGTCAAGGCTTTCGACGATGCGCTCGACCTGACCGGTCTGGTGCTGACCAA
GCTCGACGGCACCGCCAAGGGCGGCGTGATCGCGGCGATTGCGCGCGAACGCAGCATTCCGCTGCGCTTTATCGGCGTCG
GCGAAAGCATCGACGATTTGCGCCCGTTTGTGGCGCGTGATTACGTCGACGCATTGTTCGACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
60.192 |
100 |
0.637 |