Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | Hhaem_RS09165 | Genome accession | NZ_AP024093 |
| Coordinates | 1866427..1867110 (+) | Length | 227 a.a. |
| NCBI ID | WP_223893568.1 | Uniprot ID | - |
| Organism | Haemophilus haemolyticus strain 2019-19 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1861427..1872110
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Hhaem_RS09150 (Hhaem_17400) | suhB | 1864151..1864954 (-) | 804 | WP_005633301.1 | inositol-1-monophosphatase | - |
| Hhaem_RS09155 (Hhaem_17410) | comN | 1865154..1865672 (+) | 519 | WP_215770196.1 | type II secretion system protein | Machinery gene |
| Hhaem_RS09160 (Hhaem_17420) | comO | 1865666..1866382 (+) | 717 | WP_223894344.1 | type II secretion system protein J | Machinery gene |
| Hhaem_RS09165 (Hhaem_17430) | comP | 1866427..1867110 (+) | 684 | WP_223893568.1 | DUF2572 family protein | Machinery gene |
| Hhaem_RS09170 (Hhaem_17440) | comQ | 1867103..1867390 (+) | 288 | WP_223894345.1 | DUF5374 domain-containing protein | Machinery gene |
| Hhaem_RS09175 (Hhaem_17450) | recC | 1867439..1870798 (+) | 3360 | WP_223893570.1 | exodeoxyribonuclease V subunit gamma | - |
| Hhaem_RS09180 (Hhaem_17460) | nrdR | 1870861..1871310 (+) | 450 | WP_223893572.1 | transcriptional regulator NrdR | - |
Sequence
Protein
Download Length: 227 a.a. Molecular weight: 25495.24 Da Isoelectric Point: 8.4559
>NTDB_id=83444 Hhaem_RS09165 WP_223893568.1 1866427..1867110(+) (comP) [Haemophilus haemolyticus strain 2019-19]
MTIQKGIITLTILIFISGLLTVILLLDDSHLSFFRAQQNQRKHYVERTLQLQKMTGEKRQTACLDLPLNNDESVKQISIT
LDGATDAIQYFLWCERMSLFKKSPTRGDNQGALKDFIHTEKLTDFRPRFSSPPKILNANKTPKLYWFSDSQAEVQINGTV
SAVLIAEGDLKLTGKGRISGAVITNGNLTLDGVTLAYGKPVVTTLVQQYSQWQLAEKSWSDFNVPDE
MTIQKGIITLTILIFISGLLTVILLLDDSHLSFFRAQQNQRKHYVERTLQLQKMTGEKRQTACLDLPLNNDESVKQISIT
LDGATDAIQYFLWCERMSLFKKSPTRGDNQGALKDFIHTEKLTDFRPRFSSPPKILNANKTPKLYWFSDSQAEVQINGTV
SAVLIAEGDLKLTGKGRISGAVITNGNLTLDGVTLAYGKPVVTTLVQQYSQWQLAEKSWSDFNVPDE
Nucleotide
Download Length: 684 bp
>NTDB_id=83444 Hhaem_RS09165 WP_223893568.1 1866427..1867110(+) (comP) [Haemophilus haemolyticus strain 2019-19]
ATGACAATACAAAAAGGCATTATTACGCTGACTATTCTGATTTTTATTTCAGGTTTATTAACCGTAATCTTATTGTTGGA
TGACAGTCATTTAAGTTTTTTTCGTGCGCAACAAAATCAACGAAAACACTATGTAGAAAGAACATTACAACTACAAAAAA
TGACAGGGGAGAAAAGACAAACCGCCTGCCTTGATTTACCGTTAAATAATGATGAAAGTGTAAAGCAAATCAGCATCACG
CTTGATGGTGCCACCGATGCAATTCAATATTTTCTTTGGTGTGAAAGAATGAGCCTATTTAAAAAATCGCCCACAAGAGG
CGATAATCAAGGTGCATTGAAAGATTTTATTCACACAGAAAAACTAACGGATTTTCGACCGCGCTTTTCTTCCCCGCCCA
AGATTTTAAATGCGAATAAAACACCTAAACTATATTGGTTTTCAGATTCACAAGCGGAGGTTCAAATTAATGGCACCGTG
TCTGCCGTATTAATTGCGGAGGGAGATTTAAAACTAACGGGCAAAGGAAGGATTAGTGGCGCGGTGATCACCAACGGGAA
TTTAACTTTAGATGGGGTAACTTTAGCCTATGGAAAACCTGTCGTAACAACCTTAGTGCAACAATATAGCCAGTGGCAGT
TGGCAGAAAAAAGTTGGAGTGATTTTAATGTTCCAGATGAATAA
ATGACAATACAAAAAGGCATTATTACGCTGACTATTCTGATTTTTATTTCAGGTTTATTAACCGTAATCTTATTGTTGGA
TGACAGTCATTTAAGTTTTTTTCGTGCGCAACAAAATCAACGAAAACACTATGTAGAAAGAACATTACAACTACAAAAAA
TGACAGGGGAGAAAAGACAAACCGCCTGCCTTGATTTACCGTTAAATAATGATGAAAGTGTAAAGCAAATCAGCATCACG
CTTGATGGTGCCACCGATGCAATTCAATATTTTCTTTGGTGTGAAAGAATGAGCCTATTTAAAAAATCGCCCACAAGAGG
CGATAATCAAGGTGCATTGAAAGATTTTATTCACACAGAAAAACTAACGGATTTTCGACCGCGCTTTTCTTCCCCGCCCA
AGATTTTAAATGCGAATAAAACACCTAAACTATATTGGTTTTCAGATTCACAAGCGGAGGTTCAAATTAATGGCACCGTG
TCTGCCGTATTAATTGCGGAGGGAGATTTAAAACTAACGGGCAAAGGAAGGATTAGTGGCGCGGTGATCACCAACGGGAA
TTTAACTTTAGATGGGGTAACTTTAGCCTATGGAAAACCTGTCGTAACAACCTTAGTGCAACAATATAGCCAGTGGCAGT
TGGCAGAAAAAAGTTGGAGTGATTTTAATGTTCCAGATGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Haemophilus influenzae Rd KW20 |
88.546 |
100 |
0.885 |