Detailed information NTG0834225

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: QM226_RS26145
• Genome accession: NZ_CP125992
• Coordinates: 5029880..5031229 (-)
• Length: 449 a.a.
• NCBI ID: WP_283729422.1
• Uniprot ID: -
• Organism: Bacillus cereus strain FFI_gr_36
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5024880..5036229

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QM226_RS26125 (QM226_005239)	secA	5025201..5027708 (-)	2508	WP_000579368.1	preprotein translocase subunit SecA	-
QM226_RS26130 (QM226_005240)	hpf	5027985..5028527 (-)	543	WP_000671189.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
QM226_RS26135 (QM226_005241)	cspC	5028852..5029049 (-)	198	WP_001990088.1	cold shock protein CspC	-
QM226_RS26140 (QM226_005242)	comFC	5029176..5029880 (-)	705	WP_002157779.1	comF operon protein ComFC	-
QM226_RS26145 (QM226_005243)	comFA	5029880..5031229 (-)	1350	WP_283729422.1	ATP-dependent helicase ComFA	Machinery gene
QM226_RS26150 (QM226_005244)	-	5031357..5032667 (-)	1311	WP_283729423.1	NlpC/P60 family protein	-
QM226_RS26155 (QM226_005245)	-	5032920..5033234 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
QM226_RS26160 (QM226_005246)	-	5033408..5034250 (-)	843	WP_000844766.1	DegV family protein	-
QM226_RS26165 (QM226_005247)	-	5034490..5035125 (+)	636	WP_000926685.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51261.94 Da
• Isoelectric Point: 9.5047

>NTDB_id=834225 QM226_RS26145 WP_283729422.1 5029880..5031229(-) (comFA) [Bacillus cereus strain FFI_gr_36]
MLVGKQLLLEELPSDLRRELSDLKKEGEVICVQGVIKKASKYICQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELHSLQWKGSLSLGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELVPRLQEVFPSINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRTGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEIGLLLKGLDHRIDGVHAEDPMRKEKVEAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTESMVRAKRHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=834225 QM226_RS26145 WP_283729422.1 5029880..5031229(-) (comFA) [Bacillus cereus strain FFI_gr_36]
ATGCTCGTTGGAAAGCAGTTACTATTAGAAGAACTCCCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGGAGGG
AGAGGTCATATGTGTACAAGGCGTAATAAAGAAGGCTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAGTAAAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGGATTCATGAAAGAAAAGGAGAAAGGGAATTACATTCGTTACAGTGGAAAGGGAGTTT
GTCTCTTGGTCAGGAGCTGGCGGCGCAAGGTGTTATAGAAGCTATTAAGCAAAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGTACCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACGCATCAATTGTTACGTTATTATAGAGCGTTTC
ATGTAATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACGGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAACGGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGCTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATACCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAGGCCTGTTATTGAAAGGGTTGGATCATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGGAAGCATTTCGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTGTTTATTTTCATTACGGTAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (108-254)

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.914	93.096	0.483
comFA	Latilactobacillus sakei subsp. sakei 23K	40.704	88.641	0.361