Detailed information NTG0083411

Bioinformatically predicted

Overview

• Name: cqsA
• Type: Regulator
• Locus tag: VNTUMSATTG_RS24100
• Genome accession: NZ_AP024088
• Coordinates: 1205956..1207128 (+)
• Length: 390 a.a.
• NCBI ID: WP_004408985.1
• Uniprot ID: A0AAV2VT62
• Organism: Vibrio nigripulchritudo strain TUMSAT-TG-2018
• Function: induction of competence (predicted from homology) Competence regulation

Genomic Context

Location: 1200956..1212128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNTUMSATTG_RS24080 (VNTUMSATTG_47050)	ylqF	1201167..1202102 (+)	936	WP_022599423.1	ribosome biogenesis GTPase YlqF	-
VNTUMSATTG_RS24085 (VNTUMSATTG_47060)	-	1202502..1203293 (+)	792	WP_200767562.1	EAL domain-containing protein	-
VNTUMSATTG_RS24090 (VNTUMSATTG_47070)	-	1203320..1204318 (-)	999	WP_200767563.1	GTP-binding protein	-
VNTUMSATTG_RS24095 (VNTUMSATTG_47080)	-	1204762..1205733 (+)	972	WP_404819608.1	TDT family transporter	-
VNTUMSATTG_RS24100 (VNTUMSATTG_47090)	cqsA	1205956..1207128 (+)	1173	WP_004408985.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
VNTUMSATTG_RS24105 (VNTUMSATTG_47100)	-	1207302..1209044 (-)	1743	WP_158502641.1	hybrid sensor histidine kinase/response regulator	-
VNTUMSATTG_RS24110 (VNTUMSATTG_47110)	-	1209818..1210231 (-)	414	WP_200767565.1	DUF4440 domain-containing protein	-
VNTUMSATTG_RS24115 (VNTUMSATTG_47120)	-	1210379..1210708 (+)	330	WP_200767566.1	helix-turn-helix domain-containing protein	-
VNTUMSATTG_RS24120 (VNTUMSATTG_47130)	-	1210835..1211992 (-)	1158	WP_200767567.1	carboxylesterase	-

Sequence

Protein

• Length: 390 a.a.
• Molecular weight: 43206.11 Da
• Isoelectric Point: 6.1542

>NTDB_id=83411 VNTUMSATTG_RS24100 WP_004408985.1 1205956..1207128(+) (cqsA) [Vibrio nigripulchritudo strain TUMSAT-TG-2018]
MSNLTAKPLPNFIENKLENYLEKNIYSRNNGKHIVQGLLPNDDSIVLRSNDYLAICNHDYIKERQISALTHAKREPIMSA
VFQDQTIEEGSFEQKFADFLGFDHCIITQSGWAANVGLLQTIADENTHIYIDFFAHMSLWHGAQNANSKIHPFLHNRPKN
LLKQIKKYGPGIVVIDSVYSTHGTVAPLKEFVEVANEQGCAIIVDESHSIGTHGPHGAGLLAELGLTDKVDFVTTSLAKT
FSYRAGAILCHHKVHECLPFISLPAIFSSGIIPYEMEALKATLELIKGSDERREDLFNKSHRLIAGLKSLDISTDSDSQI
VAIETGTEENTEKVRDFFELNGIFGAVFCSPATPKNKSVIRLSVNSDVSDSELDKVLTVCSLAKEKGLLQ

Nucleotide

• Length: 1173 bp

>NTDB_id=83411 VNTUMSATTG_RS24100 WP_004408985.1 1205956..1207128(+) (cqsA) [Vibrio nigripulchritudo strain TUMSAT-TG-2018]
ATGAGTAACTTAACAGCTAAACCGCTGCCGAATTTTATTGAGAATAAACTTGAGAACTACCTCGAGAAGAACATTTACTC
ACGAAATAACGGCAAACACATCGTCCAGGGCTTGCTGCCAAACGATGATTCGATAGTACTTCGTAGTAACGACTACTTGG
CAATCTGTAATCACGATTACATTAAGGAGAGACAAATCAGTGCGCTTACCCATGCTAAGCGCGAGCCGATCATGTCGGCG
GTATTTCAGGACCAAACCATCGAAGAAGGTTCTTTCGAGCAGAAATTTGCTGATTTTCTAGGCTTTGACCACTGCATTAT
CACTCAGTCAGGCTGGGCGGCAAACGTGGGGCTTCTCCAGACCATCGCCGATGAAAACACTCACATTTACATCGACTTTT
TCGCTCATATGTCCTTGTGGCATGGTGCACAAAACGCAAACAGTAAGATCCACCCCTTCCTACACAATCGTCCTAAGAAC
TTACTGAAGCAGATAAAGAAATACGGACCCGGTATTGTGGTTATCGACTCGGTATACAGTACTCACGGAACGGTCGCACC
ATTGAAAGAATTTGTCGAAGTCGCAAATGAGCAAGGCTGCGCGATCATTGTCGACGAATCTCATTCTATTGGTACACACG
GACCACACGGAGCTGGTTTGCTGGCTGAGCTAGGGTTAACGGATAAAGTTGATTTTGTTACCACCAGCCTAGCAAAAACG
TTTTCTTACCGAGCTGGCGCTATTTTGTGCCATCACAAAGTGCACGAATGTCTGCCCTTTATCTCACTTCCTGCCATCTT
CAGTTCGGGCATCATTCCTTACGAAATGGAGGCACTCAAAGCAACGCTGGAATTGATTAAGGGAAGCGACGAAAGACGCG
AGGATTTATTCAATAAATCTCATAGACTGATTGCTGGTTTGAAGTCTTTAGATATTAGTACAGACAGCGACTCTCAGATT
GTTGCTATAGAAACGGGAACAGAGGAAAACACAGAAAAAGTTAGAGACTTTTTCGAACTTAATGGCATTTTCGGTGCGGT
TTTTTGTAGCCCGGCAACGCCAAAAAATAAGAGTGTTATTCGCCTCTCTGTAAATAGCGATGTCAGTGATTCTGAGTTAG
ACAAAGTGCTTACTGTGTGTAGCTTGGCGAAAGAAAAAGGACTCTTACAATAG

Domains

Predicted by InterproScan.

• Aminotransferase class I and II (Aminotran_1_2) (45-377)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsA	Vibrio cholerae strain A1552	54.974	97.949	0.538