Detailed information NTG0083404

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: VNTUMSATTG_RS17290
• Genome accession: NZ_AP024087
• Coordinates: 3767305..3768309 (+)
• Length: 334 a.a.
• NCBI ID: WP_004405365.1
• Uniprot ID: A0AAV2VU79
• Organism: Vibrio nigripulchritudo strain TUMSAT-TG-2018
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3762305..3773309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNTUMSATTG_RS17270 (VNTUMSATTG_33570)	metJ	3762375..3762695 (+)	321	WP_004405361.1	met regulon transcriptional regulator MetJ	-
VNTUMSATTG_RS17275 (VNTUMSATTG_33580)	-	3762799..3764058 (-)	1260	WP_004405362.1	malic enzyme-like NAD(P)-binding protein	-
VNTUMSATTG_RS17280 (VNTUMSATTG_33590)	rpmE	3764328..3764546 (-)	219	WP_004405363.1	50S ribosomal protein L31	-
VNTUMSATTG_RS17285 (VNTUMSATTG_33600)	priA	3764850..3767051 (+)	2202	WP_200766257.1	primosomal protein N'	-
VNTUMSATTG_RS17290 (VNTUMSATTG_33610)	cytR	3767305..3768309 (+)	1005	WP_004405365.1	DNA-binding transcriptional regulator CytR	Regulator
VNTUMSATTG_RS17295 (VNTUMSATTG_33620)	-	3768436..3768972 (+)	537	WP_022551984.1	SPOR domain-containing protein	-
VNTUMSATTG_RS17300 (VNTUMSATTG_33630)	hslV	3769092..3769631 (+)	540	WP_022591191.1	ATP-dependent protease subunit HslV	-
VNTUMSATTG_RS17305 (VNTUMSATTG_33640)	hslU	3769642..3770973 (+)	1332	WP_022591190.1	HslU--HslV peptidase ATPase subunit	-
VNTUMSATTG_RS17310 (VNTUMSATTG_33650)	-	3771100..3772017 (+)	918	WP_200766258.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
VNTUMSATTG_RS17315 (VNTUMSATTG_33660)	rraA	3772096..3772626 (+)	531	WP_022612821.1	ribonuclease E activity regulator RraA	-
VNTUMSATTG_RS17320 (VNTUMSATTG_33670)	zapB	3772799..3773041 (-)	243	WP_004405374.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36408.85 Da
• Isoelectric Point: 6.0502

>NTDB_id=83404 VNTUMSATTG_RS17290 WP_004405365.1 3767305..3768309(+) (cytR) [Vibrio nigripulchritudo strain TUMSAT-TG-2018]
MATMKDVAQLAGVSTATVSRALMNPEKVSSTTRKRVESAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDSYFTEIIRG
IEDVAVENGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTHLPFDVSKPEQKNLPPLVMACEFAPELELPTVHIDN
LTSSFEAVNYLTQMGHSKIAQISGPDDAALCQFRNQGYQQALRRAGITMNPTYKEMGDFTFESGQKAIAKLLALPEPPTA
VFCHNDAMAIGAIKGAKAAGLKVPQDLSVVGFDDIQFAEFCDPPLTTITQPRYEIGRQAMLMLLEILKGRDVHAGSRLLE
TELKIRDSAAPPRS

Nucleotide

• Length: 1005 bp

>NTDB_id=83404 VNTUMSATTG_RS17290 WP_004405365.1 3767305..3768309(+) (cytR) [Vibrio nigripulchritudo strain TUMSAT-TG-2018]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGAGTTTCAACTGCAACGGTATCGAGGGCTTTGATGAATCCTGAGAA
GGTTTCGTCGACGACACGTAAACGTGTGGAAAGCGCCGTTTTGGAAGCTGGTTATTCGCCGAATTCACTGGCAAGAAACT
TACGACGTAATGAATCCAAAACTATCGTTGCAATCGTCCCTGACATTTGCGACTCCTACTTTACAGAGATCATTCGCGGC
ATTGAGGATGTGGCCGTGGAAAACGGGTATCTCGTATTGTTAGGAGACAGCGGTCAGCAGAAGAAACGAGAGAGCTCACT
GGTCAACCTGGTCTTTACCAAACAAGCAGACGGCATGTTGTTATTGGGGACACACCTGCCGTTTGATGTCAGCAAACCGG
AACAGAAAAACTTGCCACCACTGGTCATGGCTTGTGAATTCGCGCCGGAACTGGAATTGCCGACAGTGCACATTGATAAC
CTAACGTCTTCGTTCGAAGCGGTGAACTATCTCACCCAGATGGGTCATTCGAAGATTGCTCAGATTTCAGGGCCTGACGA
TGCAGCATTGTGTCAGTTTCGTAACCAAGGTTATCAGCAGGCTTTACGTCGCGCTGGCATCACCATGAATCCAACATACA
AAGAAATGGGCGATTTCACCTTTGAATCAGGGCAAAAGGCAATCGCAAAACTTCTGGCACTTCCGGAACCACCAACTGCC
GTTTTCTGCCACAATGACGCCATGGCAATCGGCGCTATTAAGGGAGCAAAAGCGGCTGGATTGAAAGTACCTCAAGACCT
GTCTGTTGTCGGGTTTGATGATATTCAGTTCGCGGAGTTCTGTGATCCACCATTGACGACGATTACCCAACCTCGCTATG
AGATTGGTCGTCAGGCAATGCTGATGCTGCTTGAGATACTCAAAGGCAGAGATGTACATGCCGGATCACGTCTACTGGAA
ACAGAACTGAAAATCCGAGACAGCGCAGCGCCTCCAAGAAGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	85.843	99.401	0.853
cytR	Vibrio parahaemolyticus RIMD 2210633	83.483	99.701	0.832