Detailed information NTG0834021

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QNK10_RS19605
• Genome accession: NZ_CP125982
• Coordinates: 3668264..3669409 (+)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ZKY05
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3663264..3674409

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNK10_RS19580 (QNK10_19610)	albF	3663280..3664560 (+)	1281	WP_069964371.1	M16 family metallopeptidase	-
QNK10_RS19585 (QNK10_19615)	albG	3664557..3665258 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
QNK10_RS19590 (QNK10_19620)	ywhL	3665264..3666640 (-)	1377	WP_014481223.1	YncE family protein	-
QNK10_RS19595 (QNK10_19625)	ywhK	3666679..3668034 (-)	1356	WP_014481224.1	YncE family protein	-
QNK10_RS19600	-	3668031..3668261 (-)	231	Protein_3801	hypothetical protein	-
QNK10_RS19605 (QNK10_19630)	rapF	3668264..3669409 (+)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
QNK10_RS19610 (QNK10_19635)	phrF	3669393..3669512 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
QNK10_RS19615 (QNK10_19640)	-	3669610..3670037 (+)	428	Protein_3804	YbaK/EbsC family protein	-
QNK10_RS19620 (QNK10_19645)	speB	3670102..3670974 (-)	873	WP_003227545.1	agmatinase	-
QNK10_RS19625 (QNK10_19650)	speE	3671035..3671865 (-)	831	WP_003227543.1	spermidine synthase	-
QNK10_RS19630 (QNK10_19655)	pbpG	3672068..3674143 (+)	2076	WP_015384942.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=834021 QNK10_RS19605 WP_014481226.1 3668264..3669409(+) (rapF) [Bacillus subtilis strain ZKY05]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=834021 QNK10_RS19605 WP_014481226.1 3668264..3669409(+) (rapF) [Bacillus subtilis strain ZKY05]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572