Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | QNK10_RS13095 | Genome accession | NZ_CP125982 |
| Coordinates | 2436822..2437232 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis strain ZKY05 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2432188..2460118 | 2436822..2437232 | within | 0 |
Gene organization within MGE regions
Location: 2432188..2460118
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QNK10_RS13070 (QNK10_13080) | yqeF | 2432355..2433086 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| QNK10_RS13075 (QNK10_13085) | cwlH | 2433338..2434090 (-) | 753 | WP_264379321.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| QNK10_RS13080 (QNK10_13090) | yqeD | 2434277..2434903 (+) | 627 | WP_014480319.1 | TVP38/TMEM64 family protein | - |
| QNK10_RS13085 (QNK10_13095) | gnd | 2434922..2435815 (-) | 894 | WP_069837643.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| QNK10_RS13090 (QNK10_13100) | yqeB | 2436067..2436789 (+) | 723 | WP_014480321.1 | hypothetical protein | - |
| QNK10_RS13095 (QNK10_13105) | nucA/comI | 2436822..2437232 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| QNK10_RS13100 (QNK10_13110) | sigK | 2437428..2438156 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| QNK10_RS13105 (QNK10_13115) | - | 2438156..2438254 (+) | 99 | WP_031600702.1 | hypothetical protein | - |
| QNK10_RS13110 (QNK10_13120) | - | 2438251..2438463 (-) | 213 | Protein_2533 | recombinase family protein | - |
| QNK10_RS13115 (QNK10_13125) | fumC | 2438682..2440070 (-) | 1389 | WP_014480325.1 | class II fumarate hydratase | - |
| QNK10_RS13120 (QNK10_13130) | - | 2440237..2441127 (+) | 891 | WP_014480326.1 | LysR family transcriptional regulator | - |
| QNK10_RS13125 (QNK10_13135) | - | 2442069..2442464 (+) | 396 | WP_046160622.1 | VOC family protein | - |
| QNK10_RS13130 (QNK10_13145) | - | 2443204..2444331 (-) | 1128 | WP_014480328.1 | Rap family tetratricopeptide repeat protein | - |
| QNK10_RS13135 (QNK10_13150) | - | 2444513..2446439 (+) | 1927 | Protein_2538 | ribonuclease YeeF family protein | - |
| QNK10_RS13140 (QNK10_13155) | - | 2446453..2446740 (+) | 288 | WP_014480331.1 | hypothetical protein | - |
| QNK10_RS13145 (QNK10_13160) | - | 2447143..2447583 (+) | 441 | WP_014480332.1 | SMI1/KNR4 family protein | - |
| QNK10_RS13150 (QNK10_13165) | - | 2447682..2448134 (+) | 453 | WP_014480333.1 | SMI1/KNR4 family protein | - |
| QNK10_RS13155 (QNK10_13170) | cdiI | 2448231..2448590 (+) | 360 | WP_014480334.1 | ribonuclease toxin immunity protein CdiI | - |
| QNK10_RS13160 (QNK10_13175) | - | 2448695..2449174 (+) | 480 | WP_224588637.1 | hypothetical protein | - |
| QNK10_RS13165 (QNK10_13180) | - | 2449482..2449685 (-) | 204 | WP_123772462.1 | hypothetical protein | - |
| QNK10_RS13170 (QNK10_13185) | - | 2449774..2450007 (+) | 234 | WP_224588641.1 | hypothetical protein | - |
| QNK10_RS13175 (QNK10_13190) | atxG | 2450275..2450852 (+) | 578 | Protein_2546 | suppressor of fused domain protein | - |
| QNK10_RS13180 (QNK10_13195) | - | 2450962..2451252 (+) | 291 | WP_014480337.1 | contact-dependent growth inhibition system immunity protein | - |
| QNK10_RS13185 (QNK10_13200) | istA | 2452093..2453640 (+) | 1548 | WP_014480339.1 | IS21 family transposase | - |
| QNK10_RS13190 (QNK10_13205) | istB | 2453637..2454395 (+) | 759 | WP_014479891.1 | IS21-like element helper ATPase IstB | - |
| QNK10_RS13195 | - | 2454647..2454813 (-) | 167 | Protein_2550 | peptidoglycan-binding domain-containing protein | - |
| QNK10_RS13200 (QNK10_13215) | - | 2454988..2455074 (+) | 87 | WP_072592549.1 | putative holin-like toxin | - |
| QNK10_RS13205 | - | 2455361..2455836 (-) | 476 | Protein_2552 | phage tail tube protein | - |
| QNK10_RS13210 (QNK10_13230) | terS | 2455796..2456360 (-) | 565 | Protein_2553 | phage terminase small subunit | - |
| QNK10_RS13215 (QNK10_13235) | - | 2456487..2456792 (+) | 306 | WP_264379322.1 | hypothetical protein | - |
| QNK10_RS13220 (QNK10_13245) | - | 2457185..2457664 (-) | 480 | WP_014480344.1 | hypothetical protein | - |
| QNK10_RS13225 (QNK10_13250) | - | 2458281..2458547 (+) | 267 | WP_033881358.1 | hypothetical protein | - |
| QNK10_RS13230 (QNK10_13255) | - | 2458686..2458838 (-) | 153 | WP_049832653.1 | XtrA/YqaO family protein | - |
| QNK10_RS13235 (QNK10_13260) | - | 2458921..2459043 (-) | 123 | Protein_2558 | RusA family crossover junction endodeoxyribonuclease | - |
| QNK10_RS13240 (QNK10_13265) | - | 2459006..2459254 (-) | 249 | Protein_2559 | hypothetical protein | - |
| QNK10_RS13245 (QNK10_13270) | - | 2459399..2459629 (-) | 231 | WP_224588644.1 | hypothetical protein | - |
| QNK10_RS13250 (QNK10_13275) | - | 2459938..2460118 (-) | 181 | Protein_2561 | hypothetical protein | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=833999 QNK10_RS13095 WP_009967785.1 2436822..2437232(-) (nucA/comI) [Bacillus subtilis strain ZKY05]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=833999 QNK10_RS13095 WP_009967785.1 2436822..2437232(-) (nucA/comI) [Bacillus subtilis strain ZKY05]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |