Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QNK10_RS12315 Genome accession   NZ_CP125982
Coordinates   2303490..2304293 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis strain ZKY05     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2298490..2309293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK10_RS12290 (QNK10_12300) glpQB 2299628..2300359 (-) 732 WP_043857797.1 glycerophosphodiester phosphodiesterase -
  QNK10_RS12295 (QNK10_12305) yqiI 2300438..2301058 (-) 621 WP_087614617.1 N-acetylmuramoyl-L-alanine amidase -
  QNK10_RS12300 (QNK10_12310) - 2301078..2301374 (-) 297 WP_014480225.1 hypothetical protein -
  QNK10_RS12305 (QNK10_12315) - 2301682..2301834 (+) 153 WP_121590947.1 hypothetical protein -
  QNK10_RS12310 (QNK10_12320) yqiG 2301907..2303025 (+) 1119 WP_017696437.1 NADH-dependent flavin oxidoreductase -
  QNK10_RS12315 (QNK10_12325) spo0A 2303490..2304293 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  QNK10_RS12320 (QNK10_12330) spoIVB 2304569..2305849 (-) 1281 WP_014480228.1 SpoIVB peptidase -
  QNK10_RS12325 (QNK10_12335) recN 2306024..2307754 (-) 1731 WP_014480229.1 DNA repair protein RecN Machinery gene
  QNK10_RS12330 (QNK10_12340) argR 2307791..2308240 (-) 450 WP_003230265.1 arginine repressor ArgR -
  QNK10_RS12335 (QNK10_12345) yqxC 2308338..2309183 (-) 846 WP_031600677.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=833984 QNK10_RS12315 WP_003226427.1 2303490..2304293(-) (spo0A) [Bacillus subtilis strain ZKY05]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=833984 QNK10_RS12315 WP_003226427.1 2303490..2304293(-) (spo0A) [Bacillus subtilis strain ZKY05]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGTCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGTCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTCGGTTATACTGTC
AGCATGACAAAAGCTAAACCTACCAACAGTGAATTCATTGCAATGGTTGCGGATAAGCTGAGGTTAGAGCATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1