Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QNK10_RS08035 Genome accession   NZ_CP125982
Coordinates   1516332..1516907 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain ZKY05     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1511332..1521907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK10_RS08005 (QNK10_08020) dapD 1511520..1512230 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QNK10_RS08010 (QNK10_08025) dapI 1512300..1513424 (+) 1125 WP_014476668.1 N-acetyldiaminopimelate deacetylase -
  QNK10_RS08015 (QNK10_08030) ykuS 1513486..1513731 (+) 246 WP_003232382.1 YkuS family protein -
  QNK10_RS08020 (QNK10_08035) mscT 1513768..1514571 (-) 804 WP_029317733.1 small-conductance mechanosensitive channel protein MscT -
  QNK10_RS08025 (QNK10_08040) ahpA 1514808..1515350 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  QNK10_RS08030 (QNK10_08045) ykuV 1515420..1515866 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  QNK10_RS08035 (QNK10_08050) rok 1516332..1516907 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  QNK10_RS08040 (QNK10_08055) cse15 1516948..1517913 (-) 966 WP_029317734.1 spore protein Cse15 -
  QNK10_RS08045 (QNK10_08060) mobA 1518050..1518649 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  QNK10_RS08050 (QNK10_08065) moeB 1518700..1519719 (+) 1020 WP_029317735.1 molybdopterin-synthase adenylyltransferase MoeB -
  QNK10_RS08055 (QNK10_08070) glp 1519737..1521029 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  QNK10_RS08060 (QNK10_08075) mobB 1520990..1521511 (+) 522 WP_046160345.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=833977 QNK10_RS08035 WP_003232378.1 1516332..1516907(+) (rok) [Bacillus subtilis strain ZKY05]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=833977 QNK10_RS08035 WP_003232378.1 1516332..1516907(+) (rok) [Bacillus subtilis strain ZKY05]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1