Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QNK10_RS04655 Genome accession   NZ_CP125982
Coordinates   911996..912790 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain ZKY05     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 906996..917790
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK10_RS04625 (QNK10_04635) sxzA 907835..908866 (+) 1032 WP_003233568.1 FecCD family ABC transporter permease -
  QNK10_RS04630 (QNK10_04640) yfhB 908981..909862 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  QNK10_RS04635 (QNK10_04645) yfhC 909950..910534 (+) 585 WP_032723010.1 nitroreductase -
  QNK10_RS04640 (QNK10_04650) yfhD 910573..910764 (-) 192 WP_003233561.1 YfhD family protein -
  QNK10_RS04645 (QNK10_04655) yfhE 910831..910941 (-) 111 WP_003223230.1 YfhE family protein -
  QNK10_RS04650 (QNK10_04660) yfhF 910996..911907 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  QNK10_RS04655 (QNK10_04665) recX 911996..912790 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  QNK10_RS04660 (QNK10_04670) yfhH 912792..913106 (+) 315 WP_003244592.1 YfhH family protein -
  QNK10_RS04665 (QNK10_04675) yfhI 913249..914442 (+) 1194 WP_003243500.1 MFS transporter -
  QNK10_RS04670 (QNK10_04680) sspK 914474..914626 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  QNK10_RS04675 (QNK10_04685) yfhJ 914751..915020 (+) 270 WP_003243789.1 YfhJ family protein -
  QNK10_RS04680 (QNK10_04690) - 915131..916281 (+) 1151 WP_087614160.1 IS3 family transposase -
  QNK10_RS04685 (QNK10_04695) yfhK 916455..916973 (+) 519 WP_069964064.1 SH3 domain-containing protein -
  QNK10_RS04690 (QNK10_04700) spdL 917058..917390 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=833960 QNK10_RS04655 WP_014479217.1 911996..912790(+) (recX) [Bacillus subtilis strain ZKY05]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=833960 QNK10_RS04655 WP_014479217.1 911996..912790(+) (recX) [Bacillus subtilis strain ZKY05]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992