Detailed information NTG0833959

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: SR852_RS19665
• Genome accession: NZ_CP140161
• Coordinates: 3777279..3778397 (-)
• Length: 372 a.a.
• NCBI ID: WP_011197708.1
• Uniprot ID: Q65LU3
• Organism: Bacillus licheniformis strain ATCC 14580
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3772279..3783397

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SR852_RS19635 (SR852_19635)	-	3772988..3774214 (-)	1227	WP_009328954.1	metallophosphoesterase family protein	-
SR852_RS19640 (SR852_19640)	-	3774334..3775602 (-)	1269	WP_003180232.1	ABC transporter permease	-
SR852_RS19645 (SR852_19645)	-	3775595..3776491 (-)	897	WP_011197710.1	ABC transporter ATP-binding protein	-
SR852_RS19650 (SR852_19650)	-	3776609..3776794 (+)	186	WP_003180228.1	YhzD family protein	-
SR852_RS19655 (SR852_19655)	-	3776869..3777147 (-)	279	WP_003180226.1	hypothetical protein	-
SR852_RS19660 (SR852_19660)	-	3777152..3777289 (-)	138	WP_016886158.1	hypothetical protein	-
SR852_RS19665 (SR852_19665)	rapC	3777279..3778397 (-)	1119	WP_011197708.1	Rap family tetratricopeptide repeat protein	Regulator
SR852_RS19670 (SR852_19670)	-	3778524..3779300 (-)	777	WP_011197707.1	enoyl-CoA hydratase	-
SR852_RS19675 (SR852_19675)	-	3779436..3780944 (-)	1509	WP_011197706.1	coproporphyrinogen III oxidase	-
SR852_RS19680 (SR852_19680)	-	3781087..3781950 (-)	864	WP_011197705.1	Cof-type HAD-IIB family hydrolase	-
SR852_RS19685 (SR852_19685)	-	3782397..3782750 (-)	354	WP_003180211.1	YlbF family regulator	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43384.09 Da
• Isoelectric Point: 5.7199

>NTDB_id=833959 SR852_RS19665 WP_011197708.1 3777279..3778397(-) (rapC) [Bacillus licheniformis strain ATCC 14580]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENRDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=833959 SR852_RS19665 WP_011197708.1 3777279..3778397(-) (rapC) [Bacillus licheniformis strain ATCC 14580]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCGGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

3D structure

• AlphaFold DB: Q65LU3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374