Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SR852_RS19555 Genome accession   NZ_CP140161
Coordinates   3760667..3761407 (-) Length   246 a.a.
NCBI ID   WP_009328947.1    Uniprot ID   Q65LS1
Organism   Bacillus licheniformis strain ATCC 14580     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3755667..3766407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SR852_RS19535 (SR852_19535) - 3755980..3757353 (+) 1374 WP_011197716.1 hypothetical protein -
  SR852_RS19540 (SR852_19540) - 3757495..3758667 (+) 1173 WP_162840067.1 M20 family metallopeptidase -
  SR852_RS19545 (SR852_19545) - 3758688..3759398 (-) 711 WP_011197714.1 EcsC family protein -
  SR852_RS19550 (SR852_19550) - 3759451..3760674 (-) 1224 WP_011197713.1 ABC transporter permease -
  SR852_RS19555 (SR852_19555) pptA 3760667..3761407 (-) 741 WP_009328947.1 ABC transporter ATP-binding protein Regulator
  SR852_RS19560 (SR852_19560) - 3761935..3762354 (+) 420 WP_009328949.1 HIT family protein -
  SR852_RS19565 (SR852_19565) serC 3762553..3763626 (+) 1074 WP_003180262.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  SR852_RS19570 (SR852_19570) - 3763769..3764296 (+) 528 WP_003180260.1 tryptophan transporter -
  SR852_RS19575 (SR852_19575) - 3764387..3764578 (-) 192 WP_003180258.1 hypothetical protein -
  SR852_RS19580 (SR852_19580) - 3764740..3765096 (+) 357 WP_003180256.1 YtxH domain-containing protein -
  SR852_RS19585 (SR852_19585) - 3765290..3765910 (+) 621 WP_003180254.1 HTH-type transcriptional regulator Hpr -
  SR852_RS19590 (SR852_19590) - 3765907..3766254 (-) 348 WP_003180252.1 YhaI family protein -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 28113.56 Da        Isoelectric Point: 4.9850

>NTDB_id=833957 SR852_RS19555 WP_009328947.1 3760667..3761407(-) (pptA) [Bacillus licheniformis strain ATCC 14580]
MSLLTVKELTGGYTRNPVLRDVSFAIEREQIVGLIGLNGAGKSTTIRHIIGLMEPHKGSVELNGKTFMDDPESYRSQFTF
IPETPILYEELTLKEHLELTAMAYGLSKETFEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLVEPDLYIIDE
PFLGLDPLAINALLERMNEAKKNGSAVLMSTHILATAERYCDSFIILHNGEVRAKGTLEELREQFSMEEASLDDLYLELT
KEESYE

Nucleotide


Download         Length: 741 bp        

>NTDB_id=833957 SR852_RS19555 WP_009328947.1 3760667..3761407(-) (pptA) [Bacillus licheniformis strain ATCC 14580]
ATGTCACTACTGACTGTTAAAGAGTTAACTGGAGGGTATACAAGAAACCCGGTGCTGCGCGATGTTTCATTTGCGATTGA
ACGGGAGCAGATCGTCGGGCTGATCGGTTTGAACGGAGCGGGGAAAAGCACGACGATCCGGCATATCATCGGCTTAATGG
AACCGCACAAAGGATCTGTTGAATTGAACGGCAAAACGTTCATGGACGATCCGGAAAGCTACCGTTCCCAATTTACGTTT
ATTCCGGAAACGCCGATTTTATATGAAGAGCTGACATTGAAGGAGCATTTGGAGCTGACTGCGATGGCGTACGGGCTTTC
GAAGGAAACGTTCGAGAAAAGGCTGCCGCCGCTTTTGAAGGAATTCAGAATGGAGAAGCGTCTGAAATGGTTCCCGGCCC
ATTTTTCAAAAGGAATGAAGCAGAAGGTTATGATCATGTGCGCTTTCCTTGTCGAACCTGACCTGTACATTATAGACGAA
CCGTTTCTCGGTCTTGATCCGCTGGCGATCAATGCCCTTCTCGAGCGGATGAATGAAGCGAAGAAAAACGGCTCGGCCGT
TTTGATGTCGACGCATATTTTGGCAACGGCAGAGCGATATTGCGACTCCTTCATCATTCTCCATAACGGCGAAGTGCGGG
CGAAAGGAACGCTTGAAGAGCTCAGAGAACAGTTTTCGATGGAAGAAGCGAGCCTCGATGACCTGTATCTTGAACTGACG
AAGGAAGAGAGCTATGAATAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65LS1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.676

97.967

0.565
  pptA Streptococcus thermophilus LMD-9

56.432

97.967

0.553