Detailed information NTG0833945

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: SR852_RS18780
• Genome accession: NZ_CP140161
• Coordinates: 3596141..3597058 (-)
• Length: 305 a.a.
• NCBI ID: WP_003180613.1
• Uniprot ID: A0AA90ETR0
• Organism: Bacillus licheniformis strain ATCC 14580
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3591141..3602058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SR852_RS18750 (SR852_18750)	-	3591564..3591692 (-)	129	Protein_3663	hypothetical protein	-
SR852_RS18755 (SR852_18755)	-	3591868..3592530 (+)	663	WP_009328832.1	TerC family protein	-
SR852_RS18760 (SR852_18760)	spxA	3592753..3593148 (-)	396	WP_009328833.1	transcriptional regulator SpxA	-
SR852_RS18765 (SR852_18765)	-	3593326..3593904 (-)	579	WP_003180619.1	GNAT family N-acetyltransferase	-
SR852_RS18770 (SR852_18770)	-	3594135..3595058 (-)	924	WP_011197769.1	ABC transporter ATP-binding protein	-
SR852_RS18775 (SR852_18775)	-	3595060..3596127 (-)	1068	WP_003180615.1	ABC transporter ATP-binding protein	-
SR852_RS18780 (SR852_18780)	amiD	3596141..3597058 (-)	918	WP_003180613.1	ABC transporter permease	Regulator
SR852_RS18785 (SR852_18785)	-	3597063..3597998 (-)	936	WP_003180611.1	ABC transporter permease	-
SR852_RS18790 (SR852_18790)	-	3598094..3599719 (-)	1626	WP_011197768.1	peptide ABC transporter substrate-binding protein	-
SR852_RS18795 (SR852_18795)	trpS	3600455..3601447 (+)	993	WP_011197767.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33952.29 Da
• Isoelectric Point: 8.8249

>NTDB_id=833945 SR852_RS18780 WP_003180613.1 3596141..3597058(-) (amiD) [Bacillus licheniformis strain ATCC 14580]
MQQIPKDMFEPAAVDHSEAEKISKKNLSFWTDVFLRFKENKLALFGLVVLILIALMAIFAPVFSSFQYEETDLTNANQPP
SGEHWFGTDDLGRDVFVRTWVGARISLTIGLAAALIDVLIGVIWGAISGIRGGRTDEIMMRIADILWAIPSLLMTILLLV
VMGKGLITMIVAMVITGWINMARIVRGQVLQLKNQEFVLASRTLGAKNSRIIRKHLLPNIMSPILVTMTLTVPTAIFYEA
FLSYLGLGVPQPLASWGTMATDGVQGLEYYPWRLFFPATFICLTMFAFNVIGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=833945 SR852_RS18780 WP_003180613.1 3596141..3597058(-) (amiD) [Bacillus licheniformis strain ATCC 14580]
ATGCAGCAAATACCAAAAGACATGTTTGAACCTGCAGCTGTTGACCATAGCGAAGCCGAAAAGATCTCAAAGAAAAACCT
TTCTTTTTGGACAGACGTATTCTTGAGATTTAAAGAAAACAAGCTGGCGCTGTTTGGACTGGTGGTTCTGATCCTGATCG
CTCTGATGGCTATCTTCGCGCCGGTGTTCTCAAGCTTTCAATATGAAGAAACAGATTTAACGAATGCGAACCAGCCGCCA
AGCGGTGAGCACTGGTTTGGAACAGATGACCTTGGAAGGGACGTATTCGTCCGTACATGGGTCGGCGCCCGCATCTCGCT
GACAATCGGACTCGCTGCTGCGCTGATCGACGTTTTGATCGGTGTGATATGGGGTGCGATTTCCGGCATCAGAGGCGGAC
GTACGGATGAAATTATGATGAGAATAGCAGATATTTTATGGGCGATTCCTTCTTTATTAATGACCATCCTGCTGCTCGTT
GTTATGGGAAAAGGCCTGATCACGATGATCGTGGCGATGGTTATTACGGGCTGGATCAACATGGCGAGAATCGTCCGGGG
CCAAGTACTCCAGCTTAAAAATCAGGAGTTCGTACTCGCCTCAAGAACATTGGGAGCGAAAAACTCGCGCATTATCAGAA
AGCACCTGCTGCCCAACATCATGAGCCCGATCTTGGTCACCATGACATTAACCGTTCCTACGGCTATTTTCTATGAGGCG
TTTTTAAGCTACCTCGGCCTCGGGGTTCCGCAGCCGCTTGCAAGCTGGGGAACGATGGCAACAGACGGTGTTCAGGGATT
GGAATACTACCCTTGGCGCCTGTTCTTCCCGGCTACTTTTATCTGTCTGACCATGTTTGCATTCAACGTTATCGGCGACG
GACTGCGCGACGCTTTAGATCCGAAGCTGCGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-80)

3D structure

• AlphaFold DB: A0AA90ETR0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	35.922	100	0.364
amiD	Streptococcus thermophilus LMG 18311	35.599	100	0.361
amiD	Streptococcus thermophilus LMD-9	35.599	100	0.361